RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GAGE4Q13068 117 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 GAGE5Q13069 117 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 GAGE13Q4V321 117 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 ANKRD39Q53RE8 183 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 BOD1L2Q8IYS8 172 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 UQCR10Q9UDW1 63 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 MRPS16Q9Y3D3 137 aaKnown RBP4.73□□□□□ -1.65
MSH5-217ENST00000494458 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
MSH5-217ENST00000494458 NOTCH1P46531 2555 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 MGAM2Q2M2H8 2515 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 IGLV5-45A0A087WSX0 123 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 TRBV6-8A0A0A6YYG3 113 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 IGHV3-38A0A0C4DH36 116 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 A0A1B0GUV1 79 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 PCP4L1A6NKN8 68 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 SIVA1O15304 175 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 TIRAPP58753 221 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 DAD1P61803 113 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 TNP2Q05952 138 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 STPG4Q8N801 248 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
MSH5-217ENST00000494458 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
MSH5-217ENST00000494458 KRTAP17-1Q9BYP8 105 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
MSH5-217ENST00000494458 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
MSH5-217ENST00000494458 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
MSH5-217ENST00000494458 C11orf86A6NJI1 115 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 HSBP1L1C9JCN9 74 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 E9PLD3 99 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 H0Y8G0 127 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 FAM229AH3BQW9 127 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 DEFB4AO15263 64 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
MSH5-217ENST00000494458 SMAGPQ0VAQ4 97 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 ZC2HC1BQ5TFG8 222 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 ATP6V0E2Q8NHE4 81 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 DEFB104AQ8WTQ1 72 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 VCX2Q9H322 139 aa4.71□□□□□ -1.66
MSH5-217ENST00000494458 TRBV25-1A0A075B6N4 114 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 IGKV2D-26A0A0A0MRZ7 120 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 GYPEP15421 78 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 UBE2D1P51668 147 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 MRPL23Q16540 153 aaKnown RBP4.7□□□□□ -1.66
MSH5-217ENST00000494458 SLC25A34Q6PIV7 304 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 CEMP1Q6PRD7 247 aaPredicted RBP4.7□□□□□ -1.66
MSH5-217ENST00000494458 C2orf91Q6ZV80 131 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 RETNQ9HD89 108 aa4.7□□□□□ -1.66
MSH5-217ENST00000494458 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
MSH5-217ENST00000494458 A0A096LPF7 62 aa4.69□□□□□ -1.66
MSH5-217ENST00000494458 TMEM223A0PJW6 202 aa4.69□□□□□ -1.66
MSH5-217ENST00000494458 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
MSH5-217ENST00000494458 Q6ZUT4 128 aa4.69□□□□□ -1.66
MSH5-217ENST00000494458 HIGD1BQ9P298 99 aa4.69□□□□□ -1.66
MSH5-217ENST00000494458 DYNC2H1Q8NCM8 4307 aaKnown RBP4.68□□□□□ -1.66
MSH5-217ENST00000494458 A0A0J9YXV3 536 aa4.68□□□□□ -1.66
MSH5-217ENST00000494458 LBHQ53QV2 105 aaPredicted RBP4.68□□□□□ -1.66
MSH5-217ENST00000494458 LINC00242Q5T6M2 205 aa4.68□□□□□ -1.66
MSH5-217ENST00000494458 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
MSH5-217ENST00000494458 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 A0A0J9YWU9 116 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 F5H768 121 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 CCL25O15444 150 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 PRB2P02812 416 aaPredicted RBP4.67□□□□□ -1.66
MSH5-217ENST00000494458 SEC11AP67812 179 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 CTAG1AP78358 180 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 DEFA6Q01524 100 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 LELP1Q5T871 98 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 Q6ZTC4 211 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 B9D2Q9BPU9 175 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 SNHG12Q9BXW3 62 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 ICOSQ9Y6W8 199 aa4.67□□□□□ -1.66
MSH5-217ENST00000494458 IGLV4-60A0A075B6I1 120 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 LEPROTO15243 131 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 HERVK_113P63121 156 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 COX6A2Q02221 97 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 DGAT2L7PQ6IED9 249 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 LYPD5Q6UWN5 251 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 OR5A1Q8NGJ0 315 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 C11orf45Q8TAV5 145 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 C2orf88Q9BSF0 95 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
MSH5-217ENST00000494458 DNHD1Q96M86 4753 aa4.65□□□□□ -1.66
MSH5-217ENST00000494458 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 A0A0J9YY99 117 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 M0R143 59 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 HNRNPA3P51991 378 aaKnown RBP4.65□□□□□ -1.67
MSH5-217ENST00000494458 RBX1P62877 108 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 GAGE6Q13070 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms