RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 MIAQ16674 131 aa10.14□□□□□ -0.79
ACTB-213ENST00000493945 SCGB3A1Q96QR1 104 aa10.14□□□□□ -0.79
ACTB-213ENST00000493945 IBA57-AS1B1ANH7 110 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
ACTB-213ENST00000493945 CCL25O15444 150 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 RPL39P62891 51 aaKnown RBP10.13□□□□□ -0.79
ACTB-213ENST00000493945 TEX43Q6ZNM6 134 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 ERASQ7Z444 233 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 Q8N976 141 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
ACTB-213ENST00000493945 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
ACTB-213ENST00000493945 ALMS1Q8TCU4 4167 aa10.12□□□□□ -0.79
ACTB-213ENST00000493945 TRAV8-4A0A0B4J246 113 aa10.12□□□□□ -0.79
ACTB-213ENST00000493945 REG3AQ06141 175 aa10.12□□□□□ -0.79
ACTB-213ENST00000493945 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
ACTB-213ENST00000493945 HSPB8Q9UJY1 196 aa10.12□□□□□ -0.79
ACTB-213ENST00000493945 NDUFA6P56556 154 aa10.11□□□□□ -0.79
ACTB-213ENST00000493945 SS18Q15532 418 aa10.11□□□□□ -0.79
ACTB-213ENST00000493945 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
ACTB-213ENST00000493945 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
ACTB-213ENST00000493945 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
ACTB-213ENST00000493945 VCX2Q9H322 139 aa10.1□□□□□ -0.79
ACTB-213ENST00000493945 CDC42SE2Q9NRR3 84 aa10.1□□□□□ -0.79
ACTB-213ENST00000493945 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 IFITM10A6NMD0 228 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 M0R2N4 97 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 PSCAO43653 123 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 LEPROTL1O95214 131 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 SEC11AP67812 179 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 COA6Q5JTJ3 125 aaKnown RBP10.09□□□□□ -0.79
ACTB-213ENST00000493945 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 URB1-AS1Q96HZ7 61 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 Q9HAA7 133 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 PRR34Q9NV39 138 aa10.09□□□□□ -0.79
ACTB-213ENST00000493945 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 S100A2P29034 98 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 PMCHL1Q16048 86 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 Q6ZR54 194 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 Q6ZUT4 128 aa10.08□□□□□ -0.8
ACTB-213ENST00000493945 IGKV2D-24A0A075B6R9 120 aa10.07□□□□□ -0.8
ACTB-213ENST00000493945 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
ACTB-213ENST00000493945 CLPSL2Q6UWE3 100 aa10.07□□□□□ -0.8
ACTB-213ENST00000493945 Q8N3U1 123 aa10.07□□□□□ -0.8
ACTB-213ENST00000493945 PDZD11Q5EBL8 140 aa10.06□□□□□ -0.8
ACTB-213ENST00000493945 PMVKQ15126 192 aa10.05□□□□□ -0.8
ACTB-213ENST00000493945 FAM19A2Q8N3H0 131 aa10.05□□□□□ -0.8
ACTB-213ENST00000493945 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
ACTB-213ENST00000493945 A0A096LNJ9 63 aa10.04□□□□□ -0.8
ACTB-213ENST00000493945 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
ACTB-213ENST00000493945 PRSS1P07477 247 aa10.04□□□□□ -0.8
ACTB-213ENST00000493945 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
ACTB-213ENST00000493945 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
ACTB-213ENST00000493945 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
ACTB-213ENST00000493945 EREGO14944 169 aa10.03□□□□□ -0.8
ACTB-213ENST00000493945 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
ACTB-213ENST00000493945 AMELXQ99217 191 aa10.03□□□□□ -0.8
ACTB-213ENST00000493945 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
ACTB-213ENST00000493945 LINC00310P59036 64 aa10.02□□□□□ -0.81
ACTB-213ENST00000493945 BAALCQ8WXS3 180 aa10.02□□□□□ -0.81
ACTB-213ENST00000493945 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
ACTB-213ENST00000493945 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
ACTB-213ENST00000493945 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
ACTB-213ENST00000493945 IGLV10-54A0A075B6I4 117 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 FABP4P15090 132 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 AKR1D1P51857 326 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 HERVK_113P63121 156 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 LYSTQ99698 3801 aa10.01□□□□□ -0.81
ACTB-213ENST00000493945 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
ACTB-213ENST00000493945 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
ACTB-213ENST00000493945 APOMO95445 188 aa10□□□□□ -0.81
ACTB-213ENST00000493945 XCL1P47992 114 aa10□□□□□ -0.81
ACTB-213ENST00000493945 LINC00336Q6ZUF6 198 aa10□□□□□ -0.81
ACTB-213ENST00000493945 CST9LQ9H4G1 147 aa10□□□□□ -0.81
ACTB-213ENST00000493945 DNAH1Q9P2D7 4330 aa9.99□□□□□ -0.81
ACTB-213ENST00000493945 C20orf202A1L168 122 aa9.99□□□□□ -0.81
ACTB-213ENST00000493945 MALP21145 153 aa9.99□□□□□ -0.81
ACTB-213ENST00000493945 UBE2D1P51668 147 aa9.99□□□□□ -0.81
ACTB-213ENST00000493945 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
ACTB-213ENST00000493945 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
ACTB-213ENST00000493945 H3BRM9 83 aa9.98□□□□□ -0.81
ACTB-213ENST00000493945 COX7A2LO14548 114 aa9.98□□□□□ -0.81
ACTB-213ENST00000493945 NUPR1O60356 82 aa9.98□□□□□ -0.81
ACTB-213ENST00000493945 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
ACTB-213ENST00000493945 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
ACTB-213ENST00000493945 H0Y8G0 127 aa9.97□□□□□ -0.81
ACTB-213ENST00000493945 LINC00173Q6ZV60 143 aa9.97□□□□□ -0.81
ACTB-213ENST00000493945 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
ACTB-213ENST00000493945 CHTOPQ9Y3Y2 248 aaKnown RBP9.97□□□□□ -0.81
ACTB-213ENST00000493945 F8VRH5 84 aa9.96□□□□□ -0.82
ACTB-213ENST00000493945 PLNP26678 52 aa9.96□□□□□ -0.82
ACTB-213ENST00000493945 SNRPEP62304 92 aaKnown RBP9.96□□□□□ -0.82
ACTB-213ENST00000493945 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.82
ACTB-213ENST00000493945 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.82
ACTB-213ENST00000493945 TMA7Q9Y2S6 64 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms