RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TIMM8BQ9Y5J9 83 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-222ENST00000493919 BCE1O60756 84 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 CCKP06307 115 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-222ENST00000493919 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 SPANXN5Q5MJ07 72 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 PGLYRP4Q96LB8 373 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 TRBV27A0A0K0K1C4 114 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 IAPPP10997 89 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 DEFA4P12838 97 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-222ENST00000493919 UNQ9165/PRO28630Q6UXU0 137 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 ZNF491Q8N8L2 437 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 TMEM14BQ9NUH8 114 aa8.55□□□□□ -1.04
BRCA1-222ENST00000493919 H3BUA1 57 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 VCYO14598 125 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 ZNF138P52744 262 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 Q9H8V8 135 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 NDUFC1O43677 76 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 P0C879 139 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 Q8N8P6 123 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 THAP8Q8NA92 274 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
BRCA1-222ENST00000493919 WT1-ASQ06250 92 aa8.53□□□□□ -1.04
BRCA1-222ENST00000493919 CCL24O00175 119 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 PLNP26678 52 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 PRCDQ00LT1 54 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 Q6ZRM9 215 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 DAND5Q8N907 189 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 TMEM75Q8N9X5 138 aa8.52□□□□□ -1.04
BRCA1-222ENST00000493919 FAM223BA6NKX1 122 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 C15orf32Q32M92 178 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 FAM223AQ8IWN6 122 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 Q9H3A6 140 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 RPP21Q9H633 154 aaKnown RBP8.52□□□□□ -1.05
BRCA1-222ENST00000493919 S4R3C0 116 aa8.52□□□□□ -1.05
BRCA1-222ENST00000493919 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 A0A087WW49 117 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1BA6NDE4 496 aaKnown RBP8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1EA6NEQ0 496 aaKnown RBP8.51□□□□□ -1.05
BRCA1-222ENST00000493919 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 H7BZZ5 65 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 UBE2L6O14933 153 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 IGHV3-23P01764 117 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1DP0C7P1 496 aaKnown RBP8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1A1P0DJD3 496 aaKnown RBP8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1CP0DJD4 496 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 RBMY1FQ15415 496 aaKnown RBP8.51□□□□□ -1.05
BRCA1-222ENST00000493919 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
BRCA1-222ENST00000493919 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 M0R378 163 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 Q6JHZ5 121 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 USMG5Q96IX5 58 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 FANCD2OSQ96PS1 177 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 FBN3Q75N90 2809 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 XCL1P47992 114 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 ERHP84090 104 aaKnown RBP8.5□□□□□ -1.05
BRCA1-222ENST00000493919 RIGQ13278 110 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 XCL2Q9UBD3 114 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 U3KQK5 164 aa8.5□□□□□ -1.05
BRCA1-222ENST00000493919 IGHV3-21A0A0B4J1V1 117 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 TRBV12-3P01733 135 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 CFC1BP0CG36 223 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 CFC1P0CG37 223 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 SLURP1P55000 103 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 NOTCH1P46531 2555 aa8.49□□□□□ -1.05
BRCA1-222ENST00000493919 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
BRCA1-222ENST00000493919 H7C423 109 aa8.48□□□□□ -1.05
BRCA1-222ENST00000493919 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
BRCA1-222ENST00000493919 LYPD5Q6UWN5 251 aa8.48□□□□□ -1.05
BRCA1-222ENST00000493919 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
BRCA1-222ENST00000493919 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
BRCA1-222ENST00000493919 MLANAQ16655 118 aa8.47□□□□□ -1.05
BRCA1-222ENST00000493919 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
BRCA1-222ENST00000493919 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
BRCA1-222ENST00000493919 MEGF8Q7Z7M0 2845 aa8.46□□□□□ -1.06
BRCA1-222ENST00000493919 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-222ENST00000493919 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
BRCA1-222ENST00000493919 PRSS1P07477 247 aa8.46□□□□□ -1.06
BRCA1-222ENST00000493919 Q6ZVQ6 151 aa8.46□□□□□ -1.06
BRCA1-222ENST00000493919 SLC25A29Q8N8R3 303 aa8.46□□□□□ -1.06
BRCA1-222ENST00000493919 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-222ENST00000493919 K7EIM0 57 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 LAGE3Q14657 143 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
BRCA1-222ENST00000493919 WFDC9Q8NEX5 89 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 IGHV3-35A0A0C4DH35 117 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 COX6CP09669 75 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms