RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 WDR90Q96KV7 1748 aa5.8□□□□□ -1.48
BRCA1-221ENST00000493795 CHD3Q12873 2000 aaKnown RBP5.8□□□□□ -1.48
BRCA1-221ENST00000493795 NUPR2A6NF83 97 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 CLUHP3Q96NS8 147 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 PHF3Q92576 2039 aaKnown RBP5.79□□□□□ -1.48
BRCA1-221ENST00000493795 Q8N814 137 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 C11orf1Q9H5F2 150 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 COL5A3P25940 1745 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-221ENST00000493795 NCKAP5O14513 1909 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
BRCA1-221ENST00000493795 CADP27708 2225 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 IGF2-ASQ6U949 168 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 SPAG11AQ6PDA7 123 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 ZNF702PQ9H963 129 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 A0A087WVE0 104 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 COL4A1P02462 1669 aa5.78□□□□□ -1.48
BRCA1-221ENST00000493795 CYSRT1A8MQ03 144 aa5.77□□□□□ -1.48
BRCA1-221ENST00000493795 LIMD2Q9BT23 127 aa5.77□□□□□ -1.48
BRCA1-221ENST00000493795 C2orf91Q6ZV80 131 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 Q8N3U1 123 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 MYLKQ15746 1914 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 LCTP09848 1927 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 CXCL6P80162 114 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 EGFEM1PQ0D2K5 195 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 XIRP1Q702N8 1843 aaKnown RBP5.77□□□□□ -1.49
BRCA1-221ENST00000493795 FSHBP01225 129 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 Q6ZS46 218 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 Q9BRP9 147 aa5.77□□□□□ -1.49
BRCA1-221ENST00000493795 ZDBF2Q9HCK1 2354 aa5.76□□□□□ -1.49
BRCA1-221ENST00000493795 P0C879 139 aa5.76□□□□□ -1.49
BRCA1-221ENST00000493795 A0A1B0GU69 56 aa5.76□□□□□ -1.49
BRCA1-221ENST00000493795 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
BRCA1-221ENST00000493795 CRIP1P50238 77 aa5.76□□□□□ -1.49
BRCA1-221ENST00000493795 PRLHP81277 87 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 C7orf65Q6ZTY9 151 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 TRBV10-3A0A0K0K1G6 114 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 EIF4EBP1Q13541 118 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-221ENST00000493795 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 SBF2Q86WG5 1849 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 RNASE3P12724 160 aaKnown RBP5.75□□□□□ -1.49
BRCA1-221ENST00000493795 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 INAFM1C9JVW0 142 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 MRGPRG-AS1Q2M3A8 158 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 LINC00575Q6W349 94 aa5.75□□□□□ -1.49
BRCA1-221ENST00000493795 IGLV5-52A0A0A0MRZ9 124 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 LMO4P61968 165 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 LINC00574Q9H8X3 128 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 Q6ZSV7 163 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 A0A087WYN8 130 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 SBSPONQ8IVN8 264 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 ANK1P16157 1881 aa5.74□□□□□ -1.49
BRCA1-221ENST00000493795 A0A087WSZ3 146 aa5.73□□□□□ -1.49
BRCA1-221ENST00000493795 C6orf223Q8N319 242 aa5.73□□□□□ -1.49
BRCA1-221ENST00000493795 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
BRCA1-221ENST00000493795 UNQ6190/PRO20217Q6UXQ8 127 aa5.73□□□□□ -1.49
BRCA1-221ENST00000493795 Q8N6K4 173 aa5.73□□□□□ -1.49
BRCA1-221ENST00000493795 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
BRCA1-221ENST00000493795 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 DYSFO75923 2080 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 F8WDY8 70 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 CHCHD7Q9BUK0 85 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 MED12Q93074 2177 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 TSC2P49815 1807 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 KIAA1671Q9BY89 1806 aa5.72□□□□□ -1.49
BRCA1-221ENST00000493795 MSMPQ1L6U9 139 aa5.71□□□□□ -1.49
BRCA1-221ENST00000493795 CEP290O15078 2479 aa5.71□□□□□ -1.49
BRCA1-221ENST00000493795 PLXNA4Q9HCM2 1894 aa5.71□□□□□ -1.49
BRCA1-221ENST00000493795 USF3Q68DE3 2245 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 CRIP2P52943 208 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-221ENST00000493795 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 KLLNB2CW77 178 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 PSMG3-AS1Q96PY0 264 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 DOCK7Q96N67 2140 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 C2orf48Q96LS8 159 aa5.71□□□□□ -1.5
BRCA1-221ENST00000493795 PLXNA3P51805 1871 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 ACYP2P14621 99 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 PRORYQ9H606 182 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 GREB1LQ9C091 1923 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-221ENST00000493795 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 LINC00337Q8N6G1 96 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 LINC00242Q5T6M2 205 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 WDR81Q562E7 1941 aa5.7□□□□□ -1.5
BRCA1-221ENST00000493795 FSTL3O95633 263 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-221ENST00000493795 PRR9Q5T870 116 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 Q6ZTC4 211 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 SPTBN2O15020 2390 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 NLRC5Q86WI3 1866 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 DOCK8Q8NF50 2099 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 TET1Q8NFU7 2136 aa5.69□□□□□ -1.5
BRCA1-221ENST00000493795 TICRRQ7Z2Z1 1910 aa5.68□□□□□ -1.5
BRCA1-221ENST00000493795 COL4A6Q14031 1691 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms