RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
CAB39-206ENST00000493540 TRBV6-5A0A0K0K1A5 114 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 HMSDA8MTL9 139 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 PFDN1O60925 122 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 TRGC1P0CF51 173 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 ESDP10768 282 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 ZNF25P17030 456 aaPredicted RBP4.28□□□□□ -1.72
CAB39-206ENST00000493540 RPS20P60866 119 aaKnown RBP4.28□□□□□ -1.72
CAB39-206ENST00000493540 CCL20P78556 96 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 COTL1Q14019 142 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 MAJINQ3KP22 176 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 REG3GQ6UW15 175 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 MRPL52Q86TS9 123 aaKnown RBP4.28□□□□□ -1.72
CAB39-206ENST00000493540 GATD1Q8NB37 220 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 MANBALQ9NQG1 85 aa4.28□□□□□ -1.72
CAB39-206ENST00000493540 FAM231BA6NCW3 169 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 MGPP08493 103 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 LYZL1Q6UWQ5 148 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 Q6ZRP5 223 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 OR2D3Q8NGH3 330 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 OR5A1Q8NGJ0 315 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 FAM213BQ8TBF2 198 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 SFT2D1Q8WV19 159 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 FAM210AQ96ND0 272 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
CAB39-206ENST00000493540 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 LINC00959A0A1B0GUT2 108 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 BCL2L11O43521 198 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 FGF6P10767 208 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 SULT1A2P50226 295 aa4.26□□□□□ -1.73
CAB39-206ENST00000493540 MEF2BQ02080 365 aaPredicted RBP4.26□□□□□ -1.73
CAB39-206ENST00000493540 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 TRAV26-2A0A0B4J265 109 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 K7EN84 100 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 TSHBP01222 138 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 RAB5CP51148 216 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 GTSF1Q8WW33 167 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 RPL39LQ96EH5 51 aaKnown RBP4.25□□□□□ -1.73
CAB39-206ENST00000493540 CARD19Q96LW7 228 aa4.25□□□□□ -1.73
CAB39-206ENST00000493540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
CAB39-206ENST00000493540 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 IGKV2-29A2NJV5 120 aaPredicted RBP4.24□□□□□ -1.73
CAB39-206ENST00000493540 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
CAB39-206ENST00000493540 UBE2L6O14933 153 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 PDE6DO43924 150 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 APCSP02743 223 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 GNG4P50150 75 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
CAB39-206ENST00000493540 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 PSORS1C2Q9UIG4 136 aa4.24□□□□□ -1.73
CAB39-206ENST00000493540 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
CAB39-206ENST00000493540 A0A1B0GV50 99 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 A0A1W2PNN7 141 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 RAB19A4D1S5 217 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 CCL25O15444 150 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 IFNA1P01562 189 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 BCL2P10415 239 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 CAMPP49913 170 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 FOXA3P55318 350 aaPredicted RBP4.23□□□□□ -1.73
CAB39-206ENST00000493540 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 TEX261Q6UWH6 196 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 LYPD6BQ8NI32 183 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 LINC00526Q96FQ7 95 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 TPPP3Q9BW30 176 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 RPP21Q9H633 154 aaKnown RBP4.23□□□□□ -1.73
CAB39-206ENST00000493540 BATF3Q9NR55 127 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
CAB39-206ENST00000493540 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 LOC107984640A0A0U1RRK4 108 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 SSTP61278 116 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 FAM231DQ6ZW35 169 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 ZNF664Q8N3J9 261 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 C2orf48Q96LS8 159 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 RNASE7Q9H1E1 156 aaKnown RBP4.22□□□□□ -1.73
CAB39-206ENST00000493540 BIN3Q9NQY0 253 aa4.22□□□□□ -1.73
CAB39-206ENST00000493540 IGLV4-69A0A075B6H9 119 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 H0Y9J4 135 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 I3L3M4 83 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 APOMO95445 188 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 TLX1NBP0CAT3 122 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 XCL1P47992 114 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
CAB39-206ENST00000493540 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms