RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 GAGE2AQ6NT46 116 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 PRORYQ9H606 182 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 ZFHX3Q15911 3703 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 F5H768 121 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 COX7CP15954 63 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 COX6A2Q02221 97 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 SOSTDC1Q6X4U4 206 aa11.92□□□□□ -0.5
KLF4-204ENST00000493306 PRIMA1Q86XR5 153 aa11.91□□□□□ -0.5
KLF4-204ENST00000493306 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
KLF4-204ENST00000493306 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
KLF4-204ENST00000493306 KLRB1Q12918 225 aa11.9□□□□□ -0.5
KLF4-204ENST00000493306 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
KLF4-204ENST00000493306 IGHV3OR16-12A0A075B7B8 117 aa11.89□□□□□ -0.51
KLF4-204ENST00000493306 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
KLF4-204ENST00000493306 ATOX1O00244 68 aa11.89□□□□□ -0.51
KLF4-204ENST00000493306 FAM218AQ96MZ4 157 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 PRM2P04554 102 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 MRAPQ8TCY5 172 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 MALP21145 153 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
KLF4-204ENST00000493306 HIST2H2BCQ6DN03 193 aa11.87□□□□□ -0.51
KLF4-204ENST00000493306 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
KLF4-204ENST00000493306 KLK5Q9Y337 293 aaPredicted RBP11.87□□□□□ -0.51
KLF4-204ENST00000493306 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
KLF4-204ENST00000493306 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.51
KLF4-204ENST00000493306 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
KLF4-204ENST00000493306 DNAL4O96015 105 aa11.86□□□□□ -0.51
KLF4-204ENST00000493306 CRYGAP11844 174 aa11.86□□□□□ -0.51
KLF4-204ENST00000493306 DEFB131AP59861 70 aa11.86□□□□□ -0.51
KLF4-204ENST00000493306 Q9HAA7 133 aa11.86□□□□□ -0.51
KLF4-204ENST00000493306 TRAV13-2A0A0B4J235 113 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 PF4P02776 101 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 TRAV13-1A0A0B4J241 112 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 CRPP02741 224 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
KLF4-204ENST00000493306 HIST1H4AP62805 103 aaKnown RBP11.84□□□□□ -0.51
KLF4-204ENST00000493306 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
KLF4-204ENST00000493306 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
KLF4-204ENST00000493306 TMEM89A2RUT3 159 aa11.84□□□□□ -0.51
KLF4-204ENST00000493306 RPL28P46779 137 aaKnown RBP11.84□□□□□ -0.51
KLF4-204ENST00000493306 UCNP55089 124 aa11.83□□□□□ -0.52
KLF4-204ENST00000493306 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
KLF4-204ENST00000493306 CELSR1Q9NYQ6 3014 aa11.83□□□□□ -0.52
KLF4-204ENST00000493306 ATRXP46100 2492 aa11.83□□□□□ -0.52
KLF4-204ENST00000493306 F8WDY8 70 aa11.82□□□□□ -0.52
KLF4-204ENST00000493306 HOXD3P31249 432 aaPredicted RBP11.82□□□□□ -0.52
KLF4-204ENST00000493306 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
KLF4-204ENST00000493306 RBMY1BA6NDE4 496 aaKnown RBP11.81□□□□□ -0.52
KLF4-204ENST00000493306 RBMY1EA6NEQ0 496 aaKnown RBP11.81□□□□□ -0.52
KLF4-204ENST00000493306 RS1O15537 224 aa11.81□□□□□ -0.52
KLF4-204ENST00000493306 RBMY1DP0C7P1 496 aaKnown RBP11.81□□□□□ -0.52
KLF4-204ENST00000493306 hADV29S1A0JD25 119 aa11.8□□□□□ -0.52
KLF4-204ENST00000493306 A8MTW9 85 aa11.8□□□□□ -0.52
KLF4-204ENST00000493306 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
KLF4-204ENST00000493306 C11orf72Q8NBR9 251 aa11.8□□□□□ -0.52
KLF4-204ENST00000493306 MSMBP08118 114 aa11.8□□□□□ -0.52
KLF4-204ENST00000493306 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
KLF4-204ENST00000493306 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
KLF4-204ENST00000493306 IGHV4-59P01825 116 aa11.78□□□□□ -0.52
KLF4-204ENST00000493306 Q6JHZ5 121 aa11.77□□□□□ -0.52
KLF4-204ENST00000493306 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.52
KLF4-204ENST00000493306 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
KLF4-204ENST00000493306 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
KLF4-204ENST00000493306 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
KLF4-204ENST00000493306 IGKV3D-7A0A0C4DH55 119 aa11.76□□□□□ -0.53
KLF4-204ENST00000493306 INSP01308 110 aa11.76□□□□□ -0.53
KLF4-204ENST00000493306 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
KLF4-204ENST00000493306 MIR7-3HGQ8N6C7 128 aa11.76□□□□□ -0.53
KLF4-204ENST00000493306 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
KLF4-204ENST00000493306 A0A087WYN8 130 aa11.75□□□□□ -0.53
KLF4-204ENST00000493306 H0YGX0 51 aa11.75□□□□□ -0.53
KLF4-204ENST00000493306 SERP2Q8N6R1 65 aa11.75□□□□□ -0.53
KLF4-204ENST00000493306 TMEM258P61165 79 aa11.74□□□□□ -0.53
KLF4-204ENST00000493306 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
KLF4-204ENST00000493306 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
KLF4-204ENST00000493306 AVPP01185 164 aa11.74□□□□□ -0.53
KLF4-204ENST00000493306 IGKV2-28A0A075B6P5 120 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 IGKV2D-28P01615 120 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 IGHV4-30-2A0A087WSY4 118 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 CCL19Q99731 98 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 TRBV10-1A0A0K0K1A3 114 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 C4orf26Q17RF5 130 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
KLF4-204ENST00000493306 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 DPH3Q96FX2 82 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 Q96MF0 132 aa11.73□□□□□ -0.53
KLF4-204ENST00000493306 UBE2L6O14933 153 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 TRGV1A0A0A0MS02 117 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 K7EQD1 137 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 SLURP1P55000 103 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 OBSCN-AS1Q96MR7 158 aa11.72□□□□□ -0.53
KLF4-204ENST00000493306 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms