RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
CLIP2-209ENST00000493166 MRPL52Q86TS9 123 aaKnown RBP8.44□□□□□ -1.06
CLIP2-209ENST00000493166 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CLIP2-209ENST00000493166 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
CLIP2-209ENST00000493166 LOC389332A0A1B0GUA5 103 aa8.43□□□□□ -1.06
CLIP2-209ENST00000493166 RAB5AP20339 215 aa8.43□□□□□ -1.06
CLIP2-209ENST00000493166 COX19Q49B96 90 aa8.43□□□□□ -1.06
CLIP2-209ENST00000493166 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
CLIP2-209ENST00000493166 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
CLIP2-209ENST00000493166 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
CLIP2-209ENST00000493166 PRSS47A8MTI9 375 aa8.42□□□□□ -1.06
CLIP2-209ENST00000493166 KIAA1644Q3SXP7 199 aa8.42□□□□□ -1.06
CLIP2-209ENST00000493166 C14orf177Q52M58 125 aa8.42□□□□□ -1.06
CLIP2-209ENST00000493166 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
CLIP2-209ENST00000493166 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
CLIP2-209ENST00000493166 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 GCSHP23434 173 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 ZNF664Q8N3J9 261 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 CDC42SE2Q9NRR3 84 aa8.41□□□□□ -1.06
CLIP2-209ENST00000493166 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
CLIP2-209ENST00000493166 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
CLIP2-209ENST00000493166 MT-ND6P03923 174 aa8.4□□□□□ -1.06
CLIP2-209ENST00000493166 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
CLIP2-209ENST00000493166 Q8N8P6 123 aa8.4□□□□□ -1.06
CLIP2-209ENST00000493166 TIMM21Q9BVV7 248 aa8.4□□□□□ -1.06
CLIP2-209ENST00000493166 GAGE12HA6NDE8 117 aa8.39□□□□□ -1.07
CLIP2-209ENST00000493166 CHCHD10Q8WYQ3 142 aaPredicted RBP8.39□□□□□ -1.07
CLIP2-209ENST00000493166 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
CLIP2-209ENST00000493166 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
CLIP2-209ENST00000493166 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
CLIP2-209ENST00000493166 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
CLIP2-209ENST00000493166 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 SS18Q15532 418 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
CLIP2-209ENST00000493166 Q6ZUT4 128 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
CLIP2-209ENST00000493166 K7EMI3 77 aa8.37□□□□□ -1.07
CLIP2-209ENST00000493166 CCL25O15444 150 aa8.37□□□□□ -1.07
CLIP2-209ENST00000493166 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
CLIP2-209ENST00000493166 XCL1P47992 114 aa8.37□□□□□ -1.07
CLIP2-209ENST00000493166 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
CLIP2-209ENST00000493166 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
CLIP2-209ENST00000493166 HSPG2P98160 4391 aa8.36□□□□□ -1.07
CLIP2-209ENST00000493166 RYR1P21817 5038 aa8.36□□□□□ -1.07
CLIP2-209ENST00000493166 PRSS1P07477 247 aa8.36□□□□□ -1.07
CLIP2-209ENST00000493166 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
CLIP2-209ENST00000493166 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
CLIP2-209ENST00000493166 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 hDV102S1A0JD36 115 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 C1orf196B1AJZ1 125 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 MRPS36P82909 103 aaKnown RBP8.35□□□□□ -1.07
CLIP2-209ENST00000493166 FOXI1Q12951 378 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 PRSS3P2Q8NHM4 247 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
CLIP2-209ENST00000493166 C2orf66Q6UXQ4 117 aa8.34□□□□□ -1.07
CLIP2-209ENST00000493166 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
CLIP2-209ENST00000493166 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
CLIP2-209ENST00000493166 G0S2P27469 103 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 C15orf56Q8N910 161 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 SMCO4Q9NRQ5 59 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
CLIP2-209ENST00000493166 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
CLIP2-209ENST00000493166 IFITM10A6NMD0 228 aa8.32□□□□□ -1.08
CLIP2-209ENST00000493166 FAM104AQ969W3 186 aa8.32□□□□□ -1.08
CLIP2-209ENST00000493166 TMEM141Q96I45 108 aa8.32□□□□□ -1.08
CLIP2-209ENST00000493166 HIGD2BQ4VC39 106 aa8.31□□□□□ -1.08
CLIP2-209ENST00000493166 Q6ZN92 141 aa8.31□□□□□ -1.08
CLIP2-209ENST00000493166 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
CLIP2-209ENST00000493166 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
CLIP2-209ENST00000493166 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
CLIP2-209ENST00000493166 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CLIP2-209ENST00000493166 COX7A2LO14548 114 aa8.3□□□□□ -1.08
CLIP2-209ENST00000493166 MALP21145 153 aa8.3□□□□□ -1.08
CLIP2-209ENST00000493166 TEX43Q6ZNM6 134 aa8.3□□□□□ -1.08
CLIP2-209ENST00000493166 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
CLIP2-209ENST00000493166 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
CLIP2-209ENST00000493166 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 NPSP0C0P6 89 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 XGP55808 180 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
CLIP2-209ENST00000493166 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 C2orf88Q9BSF0 95 aa8.29□□□□□ -1.08
CLIP2-209ENST00000493166 IGIPA6NJ69 53 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 HAMPP81172 84 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 C9orf163Q8N9P6 203 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 VCX2Q9H322 139 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
CLIP2-209ENST00000493166 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
CLIP2-209ENST00000493166 SLPIP03973 132 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms