RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
SAMM50-204ENST00000493161 TMEM242Q9NWH2 141 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
SAMM50-204ENST00000493161 HMSDA8MTL9 139 aa8.34□□□□□ -1.07
SAMM50-204ENST00000493161 I3L3M4 83 aa8.34□□□□□ -1.07
SAMM50-204ENST00000493161 SS18Q15532 418 aa8.34□□□□□ -1.07
SAMM50-204ENST00000493161 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
SAMM50-204ENST00000493161 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
SAMM50-204ENST00000493161 PDE6DO43924 150 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 MT-ND6P03923 174 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
SAMM50-204ENST00000493161 C1orf137Q5JT78 98 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 BIN3Q9NQY0 253 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 MUC2Q02817 5179 aa8.33□□□□□ -1.08
SAMM50-204ENST00000493161 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
SAMM50-204ENST00000493161 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
SAMM50-204ENST00000493161 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
SAMM50-204ENST00000493161 TEX261Q6UWH6 196 aa8.31□□□□□ -1.08
SAMM50-204ENST00000493161 MRPL52Q86TS9 123 aaKnown RBP8.31□□□□□ -1.08
SAMM50-204ENST00000493161 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
SAMM50-204ENST00000493161 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
SAMM50-204ENST00000493161 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
SAMM50-204ENST00000493161 LCE2BO14633 110 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 APOMO95445 188 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
SAMM50-204ENST00000493161 RGS21Q2M5E4 152 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
SAMM50-204ENST00000493161 EIF5AL1Q6IS14 154 aaKnown RBP8.3□□□□□ -1.08
SAMM50-204ENST00000493161 SMIM15Q7Z3B0 74 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 ISOC2Q96AB3 205 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
SAMM50-204ENST00000493161 COX7A2LO14548 114 aa8.29□□□□□ -1.08
SAMM50-204ENST00000493161 MALP21145 153 aa8.29□□□□□ -1.08
SAMM50-204ENST00000493161 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
SAMM50-204ENST00000493161 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
SAMM50-204ENST00000493161 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
SAMM50-204ENST00000493161 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
SAMM50-204ENST00000493161 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
SAMM50-204ENST00000493161 BATF3Q9NR55 127 aa8.28□□□□□ -1.08
SAMM50-204ENST00000493161 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
SAMM50-204ENST00000493161 C7orf77A4D0Y5 90 aa8.27□□□□□ -1.09
SAMM50-204ENST00000493161 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
SAMM50-204ENST00000493161 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
SAMM50-204ENST00000493161 TRAV13-1A0A0B4J241 112 aa8.26□□□□□ -1.09
SAMM50-204ENST00000493161 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
SAMM50-204ENST00000493161 GATCO43716 136 aaKnown RBP8.26□□□□□ -1.09
SAMM50-204ENST00000493161 DIRC1Q969H9 104 aa8.26□□□□□ -1.09
SAMM50-204ENST00000493161 C2orf48Q96LS8 159 aa8.26□□□□□ -1.09
SAMM50-204ENST00000493161 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
SAMM50-204ENST00000493161 A0A087WZ39 114 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 H0Y9J4 135 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 RAB4AP20338 218 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
SAMM50-204ENST00000493161 A8MWL6 223 aa8.24□□□□□ -1.09
SAMM50-204ENST00000493161 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
SAMM50-204ENST00000493161 AMN1Q8IY45 258 aa8.24□□□□□ -1.09
SAMM50-204ENST00000493161 PRR4Q16378 134 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 C10orf25Q5T742 122 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 Q6ZUT4 128 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 FAM231DQ6ZW35 169 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
SAMM50-204ENST00000493161 FCER1GP30273 86 aa8.22□□□□□ -1.09
SAMM50-204ENST00000493161 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
SAMM50-204ENST00000493161 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
SAMM50-204ENST00000493161 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
SAMM50-204ENST00000493161 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
SAMM50-204ENST00000493161 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
SAMM50-204ENST00000493161 VCYO14598 125 aa8.21□□□□□ -1.1
SAMM50-204ENST00000493161 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
SAMM50-204ENST00000493161 NRACQ8N912 160 aa8.21□□□□□ -1.1
SAMM50-204ENST00000493161 FAM104AQ969W3 186 aa8.21□□□□□ -1.1
SAMM50-204ENST00000493161 HIGD1CA8MV81 97 aa8.2□□□□□ -1.1
SAMM50-204ENST00000493161 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
SAMM50-204ENST00000493161 TAGLN2P37802 199 aaKnown RBP8.19□□□□□ -1.1
SAMM50-204ENST00000493161 CT83Q5H943 113 aa8.19□□□□□ -1.1
SAMM50-204ENST00000493161 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
SAMM50-204ENST00000493161 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
SAMM50-204ENST00000493161 ORAOV1Q8WV07 137 aa8.19□□□□□ -1.1
SAMM50-204ENST00000493161 BORCS7Q96B45 105 aa8.19□□□□□ -1.1
SAMM50-204ENST00000493161 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
SAMM50-204ENST00000493161 CEBPGP53567 150 aa8.18□□□□□ -1.1
SAMM50-204ENST00000493161 SUMO2P61956 95 aaKnown RBP8.18□□□□□ -1.1
SAMM50-204ENST00000493161 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
SAMM50-204ENST00000493161 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
SAMM50-204ENST00000493161 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
SAMM50-204ENST00000493161 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
SAMM50-204ENST00000493161 IGHV3OR16-9A0A0B4J2B5 98 aa8.17□□□□□ -1.1
SAMM50-204ENST00000493161 TMEM250H0YL14 139 aa8.17□□□□□ -1.1
SAMM50-204ENST00000493161 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
SAMM50-204ENST00000493161 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
SAMM50-204ENST00000493161 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
SAMM50-204ENST00000493161 FAT4Q6V0I7 4981 aa8.17□□□□□ -1.1
SAMM50-204ENST00000493161 NDUFA1O15239 70 aa8.16□□□□□ -1.1
SAMM50-204ENST00000493161 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms