RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 PRSS3P2Q8NHM4 247 aa4.52□□□□□ -1.69
SPTA1-208ENST00000492934 LYPD6BQ8NI32 183 aa4.52□□□□□ -1.69
SPTA1-208ENST00000492934 CHCHD10Q8WYQ3 142 aaPredicted RBP4.52□□□□□ -1.69
SPTA1-208ENST00000492934 SMIM12Q96EX1 92 aa4.52□□□□□ -1.69
SPTA1-208ENST00000492934 BATF3Q9NR55 127 aa4.52□□□□□ -1.69
SPTA1-208ENST00000492934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-208ENST00000492934 IGKV2-29A2NJV5 120 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-208ENST00000492934 RAB19A4D1S5 217 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 TEX46H3BTG2 121 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 NTF3P20783 257 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 CCL20P78556 96 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 TWIST1Q15672 202 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
SPTA1-208ENST00000492934 TRBV20OR9-2A0A075B6H5 130 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 HMSDA8MTL9 139 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 PDE6DO43924 150 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 FGF6P10767 208 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 XCL1P47992 114 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 MEF2BQ02080 365 aaPredicted RBP4.5□□□□□ -1.69
SPTA1-208ENST00000492934 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
SPTA1-208ENST00000492934 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 RPP21Q9H633 154 aaKnown RBP4.5□□□□□ -1.69
SPTA1-208ENST00000492934 BIN3Q9NQY0 253 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 PKIGQ9Y2B9 76 aa4.5□□□□□ -1.69
SPTA1-208ENST00000492934 A0A0J9YXV3 536 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 SDHAF1A6NFY7 115 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 NCR2O95944 276 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 NPSP0C0P6 89 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 BCL2P10415 239 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 SMIM15Q7Z3B0 74 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 C9orf62Q8N4C0 152 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 BTF3L4Q96K17 158 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 CNFNQ9BYD5 112 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 LINC00474Q9P2X8 69 aa4.49□□□□□ -1.69
SPTA1-208ENST00000492934 TRAV1-1A0A0B4J248 108 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 IGHV1-58A0A0C4DH39 117 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 H7C423 109 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 CCL25O15444 150 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
SPTA1-208ENST00000492934 SPINK6Q6UWN8 80 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 OR5A1Q8NGJ0 315 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
SPTA1-208ENST00000492934 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
SPTA1-208ENST00000492934 K7EN84 100 aa4.47□□□□□ -1.69
SPTA1-208ENST00000492934 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
SPTA1-208ENST00000492934 EIF5AL1Q6IS14 154 aaKnown RBP4.47□□□□□ -1.69
SPTA1-208ENST00000492934 TEX261Q6UWH6 196 aa4.47□□□□□ -1.69
SPTA1-208ENST00000492934 Q6ZRP5 223 aa4.47□□□□□ -1.69
SPTA1-208ENST00000492934 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
SPTA1-208ENST00000492934 TMEM242Q9NWH2 141 aa4.47□□□□□ -1.69
SPTA1-208ENST00000492934 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
SPTA1-208ENST00000492934 I3L3M4 83 aa4.46□□□□□ -1.7
SPTA1-208ENST00000492934 PMCHP20382 165 aa4.46□□□□□ -1.7
SPTA1-208ENST00000492934 CAMPP49913 170 aa4.46□□□□□ -1.7
SPTA1-208ENST00000492934 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
SPTA1-208ENST00000492934 SYCNQ0VAF6 134 aa4.46□□□□□ -1.7
SPTA1-208ENST00000492934 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 TSHBP01222 138 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 TAGLN2P37802 199 aaKnown RBP4.45□□□□□ -1.7
SPTA1-208ENST00000492934 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 GAGE2BQ13066 116 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 SS18Q15532 418 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
SPTA1-208ENST00000492934 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 TRBV6-5A0A0K0K1A5 114 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 FAM231BA6NCW3 169 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 GATCO43716 136 aaKnown RBP4.44□□□□□ -1.7
SPTA1-208ENST00000492934 GAS8-AS1O95177 125 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 ESDP10768 282 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 RPL18AQ02543 176 aaKnown RBP4.44□□□□□ -1.7
SPTA1-208ENST00000492934 CD164L2Q6UWJ8 174 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
SPTA1-208ENST00000492934 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
SPTA1-208ENST00000492934 A8MWL6 223 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 COX7A2LO14548 114 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 APOMO95445 188 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 MT-ND6P03923 174 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 FCER1GP30273 86 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 CEBPGP53567 150 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
SPTA1-208ENST00000492934 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
SPTA1-208ENST00000492934 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
SPTA1-208ENST00000492934 CAMK2N2Q96S95 79 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 CDC42SE2Q9NRR3 84 aa4.43□□□□□ -1.7
SPTA1-208ENST00000492934 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
SPTA1-208ENST00000492934 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
SPTA1-208ENST00000492934 C1orf137Q5JT78 98 aa4.42□□□□□ -1.7
SPTA1-208ENST00000492934 Q6ZUT4 128 aa4.42□□□□□ -1.7
SPTA1-208ENST00000492934 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
SPTA1-208ENST00000492934 SLC51BQ86UW2 128 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms