RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 C12orf74Q32Q52 190 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 I3L3M4 83 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 CRYBA4P53673 196 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 RBX1P62877 108 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 DNAH9Q9NYC9 4486 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 H3BUT2 72 aa9.9□□□□□ -0.82
PDZRN3-210ENST00000492909 HTN3P15516 51 aa9.9□□□□□ -0.82
PDZRN3-210ENST00000492909 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
PDZRN3-210ENST00000492909 C11orf45Q8TAV5 145 aa9.9□□□□□ -0.82
PDZRN3-210ENST00000492909 CST9LQ9H4G1 147 aa9.9□□□□□ -0.82
PDZRN3-210ENST00000492909 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 F5H768 121 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 K7EP34 96 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 GCSHP23434 173 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 GAGE4Q13068 117 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 GAGE5Q13069 117 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 TAL2Q16559 108 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 C2orf66Q6UXQ4 117 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
PDZRN3-210ENST00000492909 LOC100131303A0A0U1RQF7 123 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 FXYD2P54710 66 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 CEND1Q8N111 149 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 TM2D2Q9BX73 214 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 A0A1W2PPM0 123 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 PAX4O43316 350 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 TSHBP01222 138 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 UBE2D3P61077 147 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 UBE2D2P62837 147 aa9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
PDZRN3-210ENST00000492909 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
PDZRN3-210ENST00000492909 GYPEP15421 78 aa9.87□□□□□ -0.83
PDZRN3-210ENST00000492909 Q6ZTC4 211 aa9.87□□□□□ -0.83
PDZRN3-210ENST00000492909 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 NHLRC4P0CG21 123 aaPredicted RBP9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 COTL1Q14019 142 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 A0A0J9YY99 117 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 VSIG2Q96IQ7 327 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 CYSLTR1Q9Y271 337 aa9.86□□□□□ -0.83
PDZRN3-210ENST00000492909 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
PDZRN3-210ENST00000492909 PRSS29PA6NIE9 313 aa9.85□□□□□ -0.83
PDZRN3-210ENST00000492909 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
PDZRN3-210ENST00000492909 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
PDZRN3-210ENST00000492909 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.83
PDZRN3-210ENST00000492909 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
PDZRN3-210ENST00000492909 E9PLD3 99 aa9.83□□□□□ -0.84
PDZRN3-210ENST00000492909 FABP2P12104 132 aa9.83□□□□□ -0.84
PDZRN3-210ENST00000492909 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
PDZRN3-210ENST00000492909 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
PDZRN3-210ENST00000492909 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
PDZRN3-210ENST00000492909 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
PDZRN3-210ENST00000492909 IGIPA6NJ69 53 aa9.82□□□□□ -0.84
PDZRN3-210ENST00000492909 K7ERJ3 54 aa9.82□□□□□ -0.84
PDZRN3-210ENST00000492909 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
PDZRN3-210ENST00000492909 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
PDZRN3-210ENST00000492909 H3BNG1 76 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 RPL39P62891 51 aaKnown RBP9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 MRPL23Q16540 153 aaKnown RBP9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 PAPPA-AS1Q5QFB9 102 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 TIMM17AQ99595 171 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
PDZRN3-210ENST00000492909 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 PMVKQ15126 192 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 NTM-AS1Q6ZSK4 140 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 IGLV4-69A0A075B6H9 119 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 K7ERU9 68 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 SH2D6Q7Z4S9 175 aa9.8□□□□□ -0.84
PDZRN3-210ENST00000492909 A0A096LPF7 62 aa9.79□□□□□ -0.84
PDZRN3-210ENST00000492909 IGLL5B9A064 214 aa9.79□□□□□ -0.84
PDZRN3-210ENST00000492909 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 A0A1B0GWB2 263 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 C11orf86A6NJI1 115 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 HERVK_113P61574 105 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
PDZRN3-210ENST00000492909 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
PDZRN3-210ENST00000492909 PCP4P48539 62 aa9.77□□□□□ -0.85
PDZRN3-210ENST00000492909 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
PDZRN3-210ENST00000492909 UBE2L6O14933 153 aa9.75□□□□□ -0.85
PDZRN3-210ENST00000492909 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
PDZRN3-210ENST00000492909 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms