RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
MDC1-207ENST00000492462 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
MDC1-207ENST00000492462 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
MDC1-207ENST00000492462 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
MDC1-207ENST00000492462 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
MDC1-207ENST00000492462 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 LINC00959A0A1B0GUT2 108 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 VCYO14598 125 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 XCL1P47992 114 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 FOXI1Q12951 378 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 AP5S1Q9NUS5 200 aa7.54□□□□□ -1.2
MDC1-207ENST00000492462 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
MDC1-207ENST00000492462 CCL25O15444 150 aa7.53□□□□□ -1.2
MDC1-207ENST00000492462 MRPL52Q86TS9 123 aaKnown RBP7.53□□□□□ -1.2
MDC1-207ENST00000492462 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
MDC1-207ENST00000492462 FCER1GP30273 86 aa7.52□□□□□ -1.21
MDC1-207ENST00000492462 RNASE13Q5GAN3 156 aaKnown RBP7.52□□□□□ -1.21
MDC1-207ENST00000492462 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
MDC1-207ENST00000492462 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
MDC1-207ENST00000492462 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 A0A1B0GW15 77 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 D6R8Y8 96 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 PPP1R17O96001 155 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 NPYP01303 97 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 CKS2P33552 79 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 HBBP68871 147 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
MDC1-207ENST00000492462 CFAP161Q6P656 301 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
MDC1-207ENST00000492462 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
MDC1-207ENST00000492462 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
MDC1-207ENST00000492462 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 PPP1R2P9O14990 202 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
MDC1-207ENST00000492462 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
MDC1-207ENST00000492462 RPL37AP61513 92 aaKnown RBP7.49□□□□□ -1.21
MDC1-207ENST00000492462 RPL39P62891 51 aaKnown RBP7.49□□□□□ -1.21
MDC1-207ENST00000492462 COX6A2Q02221 97 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 SS18Q15532 418 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 Q6ZUT4 128 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 PRSS3P2Q8NHM4 247 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 SMIM2Q9BVW6 85 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
MDC1-207ENST00000492462 A0A087WYN8 130 aa7.48□□□□□ -1.21
MDC1-207ENST00000492462 S100A8P05109 93 aa7.48□□□□□ -1.21
MDC1-207ENST00000492462 RAB14P61106 215 aa7.48□□□□□ -1.21
MDC1-207ENST00000492462 RPL32P62910 135 aaKnown RBP7.48□□□□□ -1.21
MDC1-207ENST00000492462 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
MDC1-207ENST00000492462 SPACA4Q8TDM5 124 aa7.48□□□□□ -1.21
MDC1-207ENST00000492462 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
MDC1-207ENST00000492462 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 F8W036 122 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 TCAPO15273 167 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 IFITM2Q01629 132 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 DPH3Q96FX2 82 aa7.47□□□□□ -1.21
MDC1-207ENST00000492462 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
MDC1-207ENST00000492462 IGKV2-24A0A0C4DH68 120 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.22
MDC1-207ENST00000492462 CLLU1Q5K131 121 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 TMEM136Q6ZRR5 245 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 PRELID3AQ96N28 172 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 TIMM21Q9BVV7 248 aa7.46□□□□□ -1.22
MDC1-207ENST00000492462 A0A096LNI7 61 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 PHOX2AO14813 284 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 PPBPP02775 128 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 MT-ND4LP03901 98 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 ADCYAP1P18509 176 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
MDC1-207ENST00000492462 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
MDC1-207ENST00000492462 C1orf196B1AJZ1 125 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 COX7A2LO14548 114 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 MAJINQ3KP22 176 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 TMEM18Q96B42 140 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
MDC1-207ENST00000492462 IGLV4-69A0A075B6H9 119 aa7.43□□□□□ -1.22
MDC1-207ENST00000492462 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
MDC1-207ENST00000492462 SYCNQ0VAF6 134 aa7.43□□□□□ -1.22
MDC1-207ENST00000492462 SMAGPQ0VAQ4 97 aa7.43□□□□□ -1.22
MDC1-207ENST00000492462 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
MDC1-207ENST00000492462 MALP21145 153 aa7.42□□□□□ -1.22
MDC1-207ENST00000492462 Q6ZRU5 148 aa7.42□□□□□ -1.22
MDC1-207ENST00000492462 SPANXA1Q9NS26 97 aa7.42□□□□□ -1.22
MDC1-207ENST00000492462 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
MDC1-207ENST00000492462 STPG4Q8N801 248 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms