RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 SCGB1C1Q8TD33 95 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 AQP10Q96PS8 301 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 EIF5A2Q9GZV4 153 aaKnown RBP6.19□□□□□ -1.42
HDAC3-212ENST00000492407 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
HDAC3-212ENST00000492407 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
HDAC3-212ENST00000492407 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
HDAC3-212ENST00000492407 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
HDAC3-212ENST00000492407 MPV17L2Q567V2 206 aa6.18□□□□□ -1.42
HDAC3-212ENST00000492407 NTN5Q8WTR8 489 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-212ENST00000492407 JPT2Q9H910 190 aa6.18□□□□□ -1.42
HDAC3-212ENST00000492407 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
HDAC3-212ENST00000492407 TRAV21A0A0B4J279 112 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 M0R2P5 195 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 DPM2O94777 84 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 GYPEP15421 78 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 UBE2L3P68036 154 aaKnown RBP6.17□□□□□ -1.42
HDAC3-212ENST00000492407 Q6ZQT7 251 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 Q8TAT8 98 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 KCNS1Q96KK3 526 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 OTORQ9NRC9 128 aa6.17□□□□□ -1.42
HDAC3-212ENST00000492407 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 H0YIZ8 118 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 CXorf1O96002 111 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
HDAC3-212ENST00000492407 KRTAP10-1P60331 282 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 MUC21Q5SSG8 566 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 Q5XG85 94 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 PQLC2Q6ZP29 291 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
HDAC3-212ENST00000492407 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
HDAC3-212ENST00000492407 TRAV9-1A0A075B6T8 112 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 IGHV3-16A0A0C4DH30 117 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 MUC21A0A0G2JKD1 596 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 MUC21A0A140T8X8 626 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 IBA57-AS1B1ANH7 110 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 H3BMG7 143 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 UQCRQO14949 82 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 OXTP01178 125 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 TMEM258P61165 79 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 Q5VSD8 79 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 SDF2L1Q9HCN8 221 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
HDAC3-212ENST00000492407 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.43
HDAC3-212ENST00000492407 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 PGPA6NDG6 321 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 PPP1R1CQ8WVI7 109 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
HDAC3-212ENST00000492407 IGLV5-52A0A0A0MRZ9 124 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 GNRH2O43555 120 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 PSCAO43653 123 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 HERVK_113P63121 156 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 LAGE3Q14657 143 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 LRRC37A5PQ49AS3 106 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
HDAC3-212ENST00000492407 SNCGO76070 127 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 BCL2P10415 239 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 NMUP48645 174 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 FAT1Q14517 4588 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 RHOHQ15669 191 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 ZNF876PQ49A33 203 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 LELP1Q5T871 98 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 Q8N814 137 aa6.12□□□□□ -1.43
HDAC3-212ENST00000492407 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
HDAC3-212ENST00000492407 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-212ENST00000492407 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 MGST1P10620 155 aaKnown RBP6.11□□□□□ -1.43
HDAC3-212ENST00000492407 CFAP126Q5VTH2 177 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 SLC25A29Q8N8R3 303 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 IMUPQ9GZP8 106 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 MANBALQ9NQG1 85 aa6.11□□□□□ -1.43
HDAC3-212ENST00000492407 H3BUT2 72 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 J3QQQ9 107 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 MT-ND6P03923 174 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 CRYGAP11844 174 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 FUSP35637 526 aaKnown RBP eCLIP6.1□□□□□ -1.43
HDAC3-212ENST00000492407 ZFP2Q6ZN57 461 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 Q6ZSN1 163 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
HDAC3-212ENST00000492407 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 TCRAP04437 139 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms