RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
CDK9-204ENST00000491521 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
CDK9-204ENST00000491521 C20orf203Q8NBC4 194 aa9.27□□□□□ -0.93
CDK9-204ENST00000491521 CYSLTR1Q9Y271 337 aa9.27□□□□□ -0.93
CDK9-204ENST00000491521 LINC00310P59036 64 aa9.26□□□□□ -0.93
CDK9-204ENST00000491521 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
CDK9-204ENST00000491521 DGAT2L7PQ6IED9 249 aa9.26□□□□□ -0.93
CDK9-204ENST00000491521 C2orf66Q6UXQ4 117 aa9.26□□□□□ -0.93
CDK9-204ENST00000491521 A0A087WX48 190 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 H7C423 109 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 HBDP02042 147 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 PDZD11Q5EBL8 140 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
CDK9-204ENST00000491521 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
CDK9-204ENST00000491521 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
CDK9-204ENST00000491521 FGF6P10767 208 aa9.24□□□□□ -0.93
CDK9-204ENST00000491521 PKIAP61925 76 aa9.24□□□□□ -0.93
CDK9-204ENST00000491521 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
CDK9-204ENST00000491521 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
CDK9-204ENST00000491521 TOMM6Q96B49 74 aa9.24□□□□□ -0.93
CDK9-204ENST00000491521 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
CDK9-204ENST00000491521 LINC01549A6NIU2 74 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 FABP4P15090 132 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 KRTAP10-2P60368 255 aa9.23□□□□□ -0.93
CDK9-204ENST00000491521 S100A2P29034 98 aa9.22□□□□□ -0.93
CDK9-204ENST00000491521 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDK9-204ENST00000491521 Q8N976 141 aa9.22□□□□□ -0.93
CDK9-204ENST00000491521 OR5A1Q8NGJ0 315 aa9.22□□□□□ -0.93
CDK9-204ENST00000491521 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
CDK9-204ENST00000491521 A0A096LNJ9 63 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 LEPROTL1O95214 131 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 RBX1P62877 108 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
CDK9-204ENST00000491521 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
CDK9-204ENST00000491521 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.2□□□□□ -0.94
CDK9-204ENST00000491521 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
CDK9-204ENST00000491521 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
CDK9-204ENST00000491521 ERASQ7Z444 233 aa9.2□□□□□ -0.94
CDK9-204ENST00000491521 OPRPNQ99935 248 aaPredicted RBP9.2□□□□□ -0.94
CDK9-204ENST00000491521 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
CDK9-204ENST00000491521 IGLV4-60A0A075B6I1 120 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 C5orf52A6NGY3 159 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 ATP5LO75964 103 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 Q6ZN92 141 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
CDK9-204ENST00000491521 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 Q8N3U1 123 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 TMEM141Q96I45 108 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
CDK9-204ENST00000491521 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 RNASE13Q5GAN3 156 aaKnown RBP9.18□□□□□ -0.94
CDK9-204ENST00000491521 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 PAPPA-AS1Q5QFB9 102 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 MAPKAPK5-AS1Q8N8E1 139 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 VCX2Q9H322 139 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
CDK9-204ENST00000491521 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
CDK9-204ENST00000491521 IGLV4-3A0A075B6K6 122 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 EREGO14944 169 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 PRSS1P07477 247 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 Q6ZUT4 128 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
CDK9-204ENST00000491521 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
CDK9-204ENST00000491521 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
CDK9-204ENST00000491521 LINC00269Q8N2A0 174 aa9.16□□□□□ -0.94
CDK9-204ENST00000491521 H0Y8G0 127 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 NPSP0C0P6 89 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 ZC2HC1BQ5TFG8 222 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 TEX43Q6ZNM6 134 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 HIST1H2BLQ99880 126 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
CDK9-204ENST00000491521 IFITM10A6NMD0 228 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 CRPP02741 224 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 PACRGQ96M98 296 aaPredicted RBP9.14□□□□□ -0.95
CDK9-204ENST00000491521 C2orf88Q9BSF0 95 aa9.14□□□□□ -0.95
CDK9-204ENST00000491521 KRTDAPP60985 99 aa9.13□□□□□ -0.95
CDK9-204ENST00000491521 REG3AQ06141 175 aa9.13□□□□□ -0.95
CDK9-204ENST00000491521 PMVKQ15126 192 aa9.13□□□□□ -0.95
CDK9-204ENST00000491521 Q9HAA7 133 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms