RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 IQCJQ1A5X6 159 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 TRAPPC1Q9Y5R8 145 aa5.38□□□□□ -1.55
APOBEC3F-204ENST00000491387 TRAV8-4A0A0B4J246 113 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 FAM231BA6NCW3 169 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 MT-ND6P03923 174 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 SMIM17P0DL12 118 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 CTRLP40313 264 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 NDUFA6P56556 154 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 FABP9Q0Z7S8 132 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 WDR73Q6P4I2 378 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 RASL11AQ6T310 242 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 NUP35Q8NFH5 326 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 GNB1LQ9BYB4 327 aa5.37□□□□□ -1.55
APOBEC3F-204ENST00000491387 TRBV25-1A0A075B6N4 114 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 A0A1B0GUV1 79 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 HIGD1CA8MV81 97 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 REG3AQ06141 175 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 MRPL54Q6P161 138 aaKnown RBP5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 ATP5L2Q7Z4Y8 100 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 PLAC8Q9NZF1 115 aa5.36□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGHV3-64A0A075B6Q5 118 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 A0A087WYN8 130 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGHV1-24A0A0C4DH33 117 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 XKRY2A2RUG3 117 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 SLPIP03973 132 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 RPS20P60866 119 aaKnown RBP5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 CACNG7P62955 275 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 SPACA4Q8TDM5 124 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 DPH3P1Q9H4G8 78 aa5.35□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 A0A1B0GXF2 115 aa5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 HBBP68871 147 aa5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 TWIST1Q15672 202 aa5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 PGLYRP4Q96LB8 373 aa5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 LINC01600Q96MT4 127 aa5.34□□□□□ -1.55
APOBEC3F-204ENST00000491387 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 H7C1H1 209 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 APCSP02743 223 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 AKR1D1P51857 326 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 AP5S1Q9NUS5 200 aa5.33□□□□□ -1.56
APOBEC3F-204ENST00000491387 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 A0A1B0GW15 77 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 S100A8P05109 93 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 CAMPP49913 170 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 RIGQ13278 110 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 HIST3H2BBQ8N257 126 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 TMEM243Q9BU79 118 aa5.32□□□□□ -1.56
APOBEC3F-204ENST00000491387 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 F2Z2F3 143 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 NCR2O95944 276 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 S100A2P29034 98 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 AMTP48728 403 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 C7orf33Q8WU49 177 aa5.31□□□□□ -1.56
APOBEC3F-204ENST00000491387 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 PRR3P79522 188 aaKnown RBP5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 COTL1Q14019 142 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 KIAA1644Q3SXP7 199 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 DPH3Q96FX2 82 aa5.3□□□□□ -1.56
APOBEC3F-204ENST00000491387 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 UBE2L6O14933 153 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 TSHBP01222 138 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 FABP4P15090 132 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 COX6A2Q02221 97 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 BAGE3Q86Y29 109 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 AMN1Q8IY45 258 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 LINC00518Q8N0U6 118 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 LINC00526Q96FQ7 95 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
APOBEC3F-204ENST00000491387 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 SMIM6P0DI80 62 aa5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 ESDP10768 282 aa5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 RNASEKQ6P5S7 137 aaKnown RBP5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 SPINK6Q6UWN8 80 aa5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 OR10D4PQ8NGN7 298 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms