RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 C15orf56Q8N910 161 aa13.48□□□□□ -0.25
RGPD6-211ENST00000490990 TRBV24-1A0A075B6N3 115 aa13.47□□□□□ -0.25
RGPD6-211ENST00000490990 FCER1GP30273 86 aa13.47□□□□□ -0.25
RGPD6-211ENST00000490990 CKS2P33552 79 aa13.47□□□□□ -0.25
RGPD6-211ENST00000490990 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
RGPD6-211ENST00000490990 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
RGPD6-211ENST00000490990 KIR2DL4Q99706 377 aa13.47□□□□□ -0.25
RGPD6-211ENST00000490990 F8W036 122 aa13.46□□□□□ -0.25
RGPD6-211ENST00000490990 SLPIP03973 132 aa13.46□□□□□ -0.25
RGPD6-211ENST00000490990 C20orf78Q9BR46 151 aa13.46□□□□□ -0.25
RGPD6-211ENST00000490990 CDC42SE2Q9NRR3 84 aa13.46□□□□□ -0.25
RGPD6-211ENST00000490990 RPL32P62910 135 aaKnown RBP13.45□□□□□ -0.26
RGPD6-211ENST00000490990 FOXI1Q12951 378 aa13.45□□□□□ -0.26
RGPD6-211ENST00000490990 CFAP161Q6P656 301 aa13.45□□□□□ -0.26
RGPD6-211ENST00000490990 SDIM1Q6ZPB5 146 aa13.45□□□□□ -0.26
RGPD6-211ENST00000490990 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
RGPD6-211ENST00000490990 LINC00959A0A1B0GUT2 108 aa13.44□□□□□ -0.26
RGPD6-211ENST00000490990 D6R8Y8 96 aa13.44□□□□□ -0.26
RGPD6-211ENST00000490990 TNFRSF6BO95407 300 aa13.44□□□□□ -0.26
RGPD6-211ENST00000490990 PLA2G1BP04054 148 aaKnown RBP13.44□□□□□ -0.26
RGPD6-211ENST00000490990 ATP5L2Q7Z4Y8 100 aa13.44□□□□□ -0.26
RGPD6-211ENST00000490990 ZNF664Q8N3J9 261 aa13.44□□□□□ -0.26
RGPD6-211ENST00000490990 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
RGPD6-211ENST00000490990 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
RGPD6-211ENST00000490990 CSDC2Q9Y534 153 aaKnown RBP13.43□□□□□ -0.26
RGPD6-211ENST00000490990 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
RGPD6-211ENST00000490990 CCL25O15444 150 aa13.42□□□□□ -0.26
RGPD6-211ENST00000490990 XCL1P47992 114 aa13.42□□□□□ -0.26
RGPD6-211ENST00000490990 ANAPC16Q96DE5 110 aa13.42□□□□□ -0.26
RGPD6-211ENST00000490990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
RGPD6-211ENST00000490990 MYCBP2O75592 4640 aa13.42□□□□□ -0.26
RGPD6-211ENST00000490990 NPYP01303 97 aa13.41□□□□□ -0.26
RGPD6-211ENST00000490990 PPBPP02775 128 aa13.41□□□□□ -0.26
RGPD6-211ENST00000490990 IFITM2Q01629 132 aa13.41□□□□□ -0.26
RGPD6-211ENST00000490990 SMIM2Q9BVW6 85 aa13.41□□□□□ -0.26
RGPD6-211ENST00000490990 IGHV3-64A0A075B6Q5 118 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
RGPD6-211ENST00000490990 PANO1I0J062 215 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 PHOX2AO14813 284 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 MT-ND4LP03901 98 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 SS18Q15532 418 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 HIGD2BQ4VC39 106 aa13.4□□□□□ -0.26
RGPD6-211ENST00000490990 TCAPO15273 167 aa13.39□□□□□ -0.27
RGPD6-211ENST00000490990 CIRBPQ14011 172 aaKnown RBP13.38□□□□□ -0.27
RGPD6-211ENST00000490990 ORMDL3Q8N138 153 aa13.38□□□□□ -0.27
RGPD6-211ENST00000490990 TMEM18Q96B42 140 aa13.38□□□□□ -0.27
RGPD6-211ENST00000490990 TIMM21Q9BVV7 248 aa13.38□□□□□ -0.27
RGPD6-211ENST00000490990 KRTAP10-4P60372 401 aaPredicted RBP13.37□□□□□ -0.27
RGPD6-211ENST00000490990 CD164L2Q6UWJ8 174 aa13.37□□□□□ -0.27
RGPD6-211ENST00000490990 UQCC3Q6UW78 93 aa13.36□□□□□ -0.27
RGPD6-211ENST00000490990 TMEM136Q6ZRR5 245 aa13.36□□□□□ -0.27
RGPD6-211ENST00000490990 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
RGPD6-211ENST00000490990 C1orf196B1AJZ1 125 aa13.35□□□□□ -0.27
RGPD6-211ENST00000490990 ADCYAP1P18509 176 aa13.35□□□□□ -0.27
RGPD6-211ENST00000490990 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
RGPD6-211ENST00000490990 RNASE13Q5GAN3 156 aaKnown RBP13.35□□□□□ -0.27
RGPD6-211ENST00000490990 Q6ZUT4 128 aa13.35□□□□□ -0.27
RGPD6-211ENST00000490990 PRELID3AQ96N28 172 aa13.35□□□□□ -0.27
RGPD6-211ENST00000490990 DMBT1Q9UGM3 2413 aaPredicted RBP13.32□□□□□ -0.28
RGPD6-211ENST00000490990 TMEM218A2RU14 115 aa13.32□□□□□ -0.28
RGPD6-211ENST00000490990 CHTF8P0CG12 524 aa13.32□□□□□ -0.28
RGPD6-211ENST00000490990 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
RGPD6-211ENST00000490990 FAM104AQ969W3 186 aa13.32□□□□□ -0.28
RGPD6-211ENST00000490990 LAMTOR2Q9Y2Q5 125 aa13.32□□□□□ -0.28
RGPD6-211ENST00000490990 TRAV13-1A0A0B4J241 112 aa13.31□□□□□ -0.28
RGPD6-211ENST00000490990 PRSS47A8MTI9 375 aa13.31□□□□□ -0.28
RGPD6-211ENST00000490990 SPANXA1Q9NS26 97 aa13.31□□□□□ -0.28
RGPD6-211ENST00000490990 HERC1Q15751 4861 aa13.31□□□□□ -0.28
RGPD6-211ENST00000490990 COX6A2Q02221 97 aa13.3□□□□□ -0.28
RGPD6-211ENST00000490990 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
RGPD6-211ENST00000490990 PRSS3P2Q8NHM4 247 aa13.29□□□□□ -0.28
RGPD6-211ENST00000490990 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
RGPD6-211ENST00000490990 A0A087WYN8 130 aa13.28□□□□□ -0.28
RGPD6-211ENST00000490990 COX7A2LO14548 114 aa13.28□□□□□ -0.28
RGPD6-211ENST00000490990 RAB5AP20339 215 aa13.28□□□□□ -0.28
RGPD6-211ENST00000490990 RPL37AP61513 92 aaKnown RBP13.28□□□□□ -0.28
RGPD6-211ENST00000490990 MRPS36P82909 103 aaKnown RBP13.28□□□□□ -0.28
RGPD6-211ENST00000490990 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
RGPD6-211ENST00000490990 MALP21145 153 aa13.27□□□□□ -0.29
RGPD6-211ENST00000490990 MAP1LC3AQ9H492 121 aa13.27□□□□□ -0.29
RGPD6-211ENST00000490990 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 ZNF561-AS1K7EIQ3 104 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 DPH3Q96FX2 82 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 CARD19Q96LW7 228 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 SEC11CQ9BY50 192 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 CTDSP1Q9GZU7 261 aa13.26□□□□□ -0.29
RGPD6-211ENST00000490990 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
RGPD6-211ENST00000490990 PLAC8Q9NZF1 115 aa13.25□□□□□ -0.29
RGPD6-211ENST00000490990 SYCNQ0VAF6 134 aa13.24□□□□□ -0.29
RGPD6-211ENST00000490990 C5orf38Q86SI9 138 aa13.24□□□□□ -0.29
RGPD6-211ENST00000490990 COMMD7Q86VX2 200 aa13.24□□□□□ -0.29
RGPD6-211ENST00000490990 Q8N8P6 123 aa13.24□□□□□ -0.29
RGPD6-211ENST00000490990 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
RGPD6-211ENST00000490990 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
RGPD6-211ENST00000490990 A0A096LNI7 61 aa13.23□□□□□ -0.29
RGPD6-211ENST00000490990 IGKV2-24A0A0C4DH68 120 aa13.23□□□□□ -0.29
RGPD6-211ENST00000490990 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
RGPD6-211ENST00000490990 TRAV9-1A0A075B6T8 112 aa13.22□□□□□ -0.29
RGPD6-211ENST00000490990 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms