RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 NUDT3O95989 172 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 HBDP02042 147 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 LINC00694P0DN24 101 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 CRYBA4P53673 196 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 UBE2D3P61077 147 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 UBE2D2P62837 147 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 RPL36AP83881 106 aaKnown RBP5.24□□□□□ -1.57
CLDN1-202ENST00000490800 GAGE1Q13065 139 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 GAGE4Q13068 117 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 GAGE5Q13069 117 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 RHOHQ15669 191 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 ORMDL2Q53FV1 153 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 LINC00336Q6ZUF6 198 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 Q8N1X5 172 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 ZNRF2Q8NHG8 242 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 RPL36ALQ969Q0 106 aaKnown RBP5.24□□□□□ -1.57
CLDN1-202ENST00000490800 KIR2DL4Q99706 377 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 HHLA3Q9XRX5 114 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
CLDN1-202ENST00000490800 IGHV3-38A0A0C4DH36 116 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 RTL8CO15255 209 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 LEPROTL1O95214 131 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 ATP5G1P05496 136 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 C3orf79P0CE67 100 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 UBE2DNLQ8IWF7 75 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 PRADC1Q9BSG0 188 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 PRO0255Q9UI72 69 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 HSPB8Q9UJY1 196 aa5.23□□□□□ -1.57
CLDN1-202ENST00000490800 DNAH11Q96DT5 4516 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 A0A1B0GVY2 172 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 F5H768 121 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 KRTDAPP60985 99 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 PYY3Q5JQD4 70 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 DAZ4Q86SG3 579 aaKnown RBP5.22□□□□□ -1.57
CLDN1-202ENST00000490800 TOMM6Q96B49 74 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 VSIG2Q96IQ7 327 aa5.22□□□□□ -1.57
CLDN1-202ENST00000490800 DAZ3Q9NR90 486 aaKnown RBP5.22□□□□□ -1.57
CLDN1-202ENST00000490800 PKD1P98161 4303 aa5.21□□□□□ -1.57
CLDN1-202ENST00000490800 RPL39P62891 51 aaKnown RBP5.21□□□□□ -1.58
CLDN1-202ENST00000490800 COTL1Q14019 142 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 JOSD1Q15040 202 aaPredicted RBP5.21□□□□□ -1.58
CLDN1-202ENST00000490800 DGAT2L7PQ6IED9 249 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 SPATA12Q7Z6I5 190 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 Q8N976 141 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 C20orf203Q8NBC4 194 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 IFI27L1Q96BM0 104 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 CHCHD7Q9BUK0 85 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 CYSLTR1Q9Y271 337 aa5.21□□□□□ -1.58
CLDN1-202ENST00000490800 TRAV26-1A0A087WT03 109 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 A0A0J9YY99 117 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 SYS1-DBNDD2H3BUS1 97 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 ATP5LO75964 103 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 SMIM6P0DI80 62 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 G0S2P27469 103 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 Q6ZR54 194 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 NTM-AS1Q6ZSK4 140 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 SCGB3A1Q96QR1 104 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 MAP1LC3CQ9BXW4 147 aa5.2□□□□□ -1.58
CLDN1-202ENST00000490800 LINC01549A6NIU2 74 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 IGIPA6NJ69 53 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 PET117Q6UWS5 81 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 ERASQ7Z444 233 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 LINC00518Q8N0U6 118 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 ATP6V0E2Q8NHE4 81 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 GTSF1LQ9H1H1 148 aa5.19□□□□□ -1.58
CLDN1-202ENST00000490800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.18□□□□□ -1.58
CLDN1-202ENST00000490800 IGKV2-29A2NJV5 120 aaPredicted RBP5.18□□□□□ -1.58
CLDN1-202ENST00000490800 H0Y8G0 127 aa5.18□□□□□ -1.58
CLDN1-202ENST00000490800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.18□□□□□ -1.58
CLDN1-202ENST00000490800 C1orf134Q5TEV5 83 aa5.18□□□□□ -1.58
CLDN1-202ENST00000490800 LINC01545Q5VT33 79 aa5.18□□□□□ -1.58
CLDN1-202ENST00000490800 TMEM141Q96I45 108 aa5.18□□□□□ -1.58
CLDN1-202ENST00000490800 TIMM17AQ99595 171 aa5.18□□□□□ -1.58
CLDN1-202ENST00000490800 RYR1P21817 5038 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 A0A096LPF7 62 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 TRBV6-8A0A0A6YYG3 113 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 H3BNG1 76 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 PRSS1P07477 247 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 MRPL23Q16540 153 aaKnown RBP5.17□□□□□ -1.58
CLDN1-202ENST00000490800 TMEM97Q5BJF2 176 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 Q6ZN92 141 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 BAALCQ8WXS3 180 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 C12orf57Q99622 126 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 OPRPNQ99935 248 aaPredicted RBP5.17□□□□□ -1.58
CLDN1-202ENST00000490800 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 SPANXA1Q9NS26 97 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 UBE2D4Q9Y2X8 147 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 PYGO1Q9Y3Y4 419 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 ICOSQ9Y6W8 199 aa5.17□□□□□ -1.58
CLDN1-202ENST00000490800 PKHD1P08F94 4074 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 IGLV4-3A0A075B6K6 122 aa5.16□□□□□ -1.58
CLDN1-202ENST00000490800 TRBV25-1A0A075B6N4 114 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms