RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ZNF664Q8N3J9 261 aa5.02□□□□□ -1.61
USP39-216ENST00000490193 FER1L6-AS1Q8NA97 138 aa5.02□□□□□ -1.61
USP39-216ENST00000490193 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
USP39-216ENST00000490193 IGHV1-58A0A0C4DH39 117 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 IGKV3OR2-268A0A0C4DH90 116 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 F2Z2F3 143 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 NCR2O95944 276 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 NTF3P20783 257 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 RPS20P60866 119 aaKnown RBP5.01□□□□□ -1.61
USP39-216ENST00000490193 Q6ZNX1 250 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 TMUB2Q71RG4 321 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 MBD3L1Q8WWY6 194 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
USP39-216ENST00000490193 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
USP39-216ENST00000490193 C19orf71A6NCJ1 209 aa5□□□□□ -1.61
USP39-216ENST00000490193 F8W036 122 aa5□□□□□ -1.61
USP39-216ENST00000490193 ZNF25P17030 456 aaPredicted RBP5□□□□□ -1.61
USP39-216ENST00000490193 PTTG1IPP53801 180 aa5□□□□□ -1.61
USP39-216ENST00000490193 AMMECR1LQ6DCA0 310 aa5□□□□□ -1.61
USP39-216ENST00000490193 OR2D3Q8NGH3 330 aa5□□□□□ -1.61
USP39-216ENST00000490193 OR5A1Q8NGJ0 315 aa5□□□□□ -1.61
USP39-216ENST00000490193 C11orf52Q96A22 123 aa5□□□□□ -1.61
USP39-216ENST00000490193 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 G3V3Q6 166 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 FGF6P10767 208 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 RPL35P42766 123 aaKnown RBP4.99□□□□□ -1.61
USP39-216ENST00000490193 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 SFT2D1Q8WV19 159 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 SMIM12Q96EX1 92 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 CNFNQ9BYD5 112 aa4.99□□□□□ -1.61
USP39-216ENST00000490193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.98□□□□□ -1.61
USP39-216ENST00000490193 TRAV26-2A0A0B4J265 109 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 LINC00959A0A1B0GUT2 108 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 A0A1W2PNN7 141 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 IGKV2-29A2NJV5 120 aaPredicted RBP4.98□□□□□ -1.61
USP39-216ENST00000490193 UMAD1C9J7I0 102 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 F8WDY8 70 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 CCL25O15444 150 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 APCSP02743 223 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 CTRLP40313 264 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 XCL1P47992 114 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 RNASEKQ6P5S7 137 aaKnown RBP4.98□□□□□ -1.61
USP39-216ENST00000490193 LYZL1Q6UWQ5 148 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 C9orf62Q8N4C0 152 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 KCNRGQ8N5I3 272 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 GATD1Q8NB37 220 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 LINC00526Q96FQ7 95 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 C12orf57Q99622 126 aa4.98□□□□□ -1.61
USP39-216ENST00000490193 ZNF561-AS1K7EIQ3 104 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 MT-ND6P03923 174 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 CAMPP49913 170 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 CENPWQ5EE01 88 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 CD164L2Q6UWJ8 174 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 PRR26Q8N8Z3 221 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 FAM213BQ8TBF2 198 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 ISOC2Q96AB3 205 aa4.97□□□□□ -1.61
USP39-216ENST00000490193 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
USP39-216ENST00000490193 IFNA1P01562 189 aa4.96□□□□□ -1.62
USP39-216ENST00000490193 CCL20P78556 96 aa4.96□□□□□ -1.62
USP39-216ENST00000490193 C9orf116Q5BN46 136 aaPredicted RBP4.96□□□□□ -1.62
USP39-216ENST00000490193 NUP35Q8NFH5 326 aa4.96□□□□□ -1.62
USP39-216ENST00000490193 BTF3L4Q96K17 158 aa4.96□□□□□ -1.62
USP39-216ENST00000490193 IGLV4-69A0A075B6H9 119 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 IGLV1-50A0A075B6I6 118 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 A0A1B0GV50 99 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 SDHAF1A6NFY7 115 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 H0Y9J4 135 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 ARPC5O15511 151 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 APOMO95445 188 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 ESDP10768 282 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 CEBPGP53567 150 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 GAGE2BQ13066 116 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 SS18Q15532 418 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 TEX261Q6UWH6 196 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
USP39-216ENST00000490193 RPL39LQ96EH5 51 aaKnown RBP4.95□□□□□ -1.62
USP39-216ENST00000490193 TMEM101Q96IK0 257 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 MANBALQ9NQG1 85 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 CDC42SE2Q9NRR3 84 aa4.95□□□□□ -1.62
USP39-216ENST00000490193 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 BCL2P10415 239 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 GNG4P50150 75 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 EIF5AP63241 154 aaKnown RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 MEF2BQ02080 365 aaPredicted RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 ZNF345Q14585 488 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 TWIST1Q15672 202 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 EIF5AL1Q6IS14 154 aaKnown RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 PHF5AQ7RTV0 110 aaKnown RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 SMIM15Q7Z3B0 74 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 C2orf48Q96LS8 159 aa4.94□□□□□ -1.62
USP39-216ENST00000490193 PACRGQ96M98 296 aaPredicted RBP4.94□□□□□ -1.62
USP39-216ENST00000490193 BIN3Q9NQY0 253 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms