RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 PKD1P98161 4303 aa11.59□□□□□ -0.55
ERCC3-207ENST00000490062 IFI27P40305 119 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-207ENST00000490062 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
ERCC3-207ENST00000490062 C1orf43Q9BWL3 253 aa11.59□□□□□ -0.55
ERCC3-207ENST00000490062 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
ERCC3-207ENST00000490062 PYGO1Q9Y3Y4 419 aa11.59□□□□□ -0.55
ERCC3-207ENST00000490062 A0A087WTM6 91 aa11.58□□□□□ -0.56
ERCC3-207ENST00000490062 COLCA2A8K830 154 aa11.58□□□□□ -0.56
ERCC3-207ENST00000490062 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 PSCAO43653 123 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 NPSP0C0P6 89 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 G0S2P27469 103 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
ERCC3-207ENST00000490062 ZNF664Q8N3J9 261 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
ERCC3-207ENST00000490062 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
ERCC3-207ENST00000490062 DGAT2L7PQ6IED9 249 aa11.56□□□□□ -0.56
ERCC3-207ENST00000490062 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
ERCC3-207ENST00000490062 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
ERCC3-207ENST00000490062 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
ERCC3-207ENST00000490062 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
ERCC3-207ENST00000490062 CCL25O15444 150 aa11.55□□□□□ -0.56
ERCC3-207ENST00000490062 S100A1P23297 94 aa11.55□□□□□ -0.56
ERCC3-207ENST00000490062 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
ERCC3-207ENST00000490062 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
ERCC3-207ENST00000490062 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
ERCC3-207ENST00000490062 DYNC1H1Q14204 4646 aaKnown RBP11.54□□□□□ -0.56
ERCC3-207ENST00000490062 EREGO14944 169 aa11.53□□□□□ -0.56
ERCC3-207ENST00000490062 BIRC6Q9NR09 4857 aa11.53□□□□□ -0.56
ERCC3-207ENST00000490062 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
ERCC3-207ENST00000490062 Q6ZUT4 128 aa11.52□□□□□ -0.57
ERCC3-207ENST00000490062 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
ERCC3-207ENST00000490062 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
ERCC3-207ENST00000490062 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
ERCC3-207ENST00000490062 FA2HQ7L5A8 372 aa11.51□□□□□ -0.57
ERCC3-207ENST00000490062 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
ERCC3-207ENST00000490062 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
ERCC3-207ENST00000490062 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 DNAH5Q8TE73 4624 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 SCO1O75880 301 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 TRGC2P03986 189 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 LINC00614P0C842 121 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 RAB5BP61020 215 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 WFDC2Q14508 124 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 Q8N814 137 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
ERCC3-207ENST00000490062 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
ERCC3-207ENST00000490062 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
ERCC3-207ENST00000490062 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
ERCC3-207ENST00000490062 C1orf196B1AJZ1 125 aa11.49□□□□□ -0.57
ERCC3-207ENST00000490062 ATP6V1G1O75348 118 aa11.49□□□□□ -0.57
ERCC3-207ENST00000490062 BAALCQ8WXS3 180 aa11.49□□□□□ -0.57
ERCC3-207ENST00000490062 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
ERCC3-207ENST00000490062 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
ERCC3-207ENST00000490062 SS18Q15532 418 aa11.48□□□□□ -0.57
ERCC3-207ENST00000490062 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
ERCC3-207ENST00000490062 TMEM141Q96I45 108 aa11.48□□□□□ -0.57
ERCC3-207ENST00000490062 AMELXQ99217 191 aa11.48□□□□□ -0.57
ERCC3-207ENST00000490062 FOXI1Q12951 378 aa11.47□□□□□ -0.57
ERCC3-207ENST00000490062 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
ERCC3-207ENST00000490062 ERASQ7Z444 233 aa11.47□□□□□ -0.57
ERCC3-207ENST00000490062 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
ERCC3-207ENST00000490062 A0A096LNJ9 63 aa11.46□□□□□ -0.57
ERCC3-207ENST00000490062 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
ERCC3-207ENST00000490062 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
ERCC3-207ENST00000490062 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
ERCC3-207ENST00000490062 CHCHD1Q96BP2 118 aaKnown RBP11.46□□□□□ -0.57
ERCC3-207ENST00000490062 OPRPNQ99935 248 aaPredicted RBP11.46□□□□□ -0.57
ERCC3-207ENST00000490062 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
ERCC3-207ENST00000490062 RNASE13Q5GAN3 156 aaKnown RBP11.45□□□□□ -0.58
ERCC3-207ENST00000490062 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
ERCC3-207ENST00000490062 Q6ZN92 141 aa11.44□□□□□ -0.58
ERCC3-207ENST00000490062 TEX43Q6ZNM6 134 aa11.44□□□□□ -0.58
ERCC3-207ENST00000490062 LINC00173Q6ZV60 143 aa11.44□□□□□ -0.58
ERCC3-207ENST00000490062 FAM19A3Q7Z5A8 133 aa11.44□□□□□ -0.58
ERCC3-207ENST00000490062 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
ERCC3-207ENST00000490062 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
ERCC3-207ENST00000490062 LECT2O14960 151 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 HBDP02042 147 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 XCL1P47992 114 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 SCGB3A1Q96QR1 104 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 VCX2Q9H322 139 aa11.42□□□□□ -0.58
ERCC3-207ENST00000490062 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
ERCC3-207ENST00000490062 UBE2D1P51668 147 aa11.41□□□□□ -0.58
ERCC3-207ENST00000490062 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
ERCC3-207ENST00000490062 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
ERCC3-207ENST00000490062 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
ERCC3-207ENST00000490062 C16orf90A8MZG2 172 aa11.4□□□□□ -0.58
ERCC3-207ENST00000490062 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
ERCC3-207ENST00000490062 GVQW2A0A096LPI5 108 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-207ENST00000490062 PRSS1P07477 247 aa11.39□□□□□ -0.59
ERCC3-207ENST00000490062 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
ERCC3-207ENST00000490062 IGHV1-58A0A0C4DH39 117 aa11.38□□□□□ -0.59
ERCC3-207ENST00000490062 COX7A2LO14548 114 aa11.38□□□□□ -0.59
ERCC3-207ENST00000490062 LINC00310P59036 64 aa11.38□□□□□ -0.59
ERCC3-207ENST00000490062 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
ERCC3-207ENST00000490062 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
ERCC3-207ENST00000490062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms