RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	KRTAP26-1	Q6PEX3	210 aa		7.26	□□□□□ -1.25
GGA1-222	ENST00000489772	ATP5L2	Q7Z4Y8	100 aa		7.26	□□□□□ -1.25
GGA1-222	ENST00000489772	KIR2DL4	Q99706	377 aa		7.26	□□□□□ -1.25
GGA1-222	ENST00000489772	IGKV3OR2-268	A0A0C4DH90	116 aa		7.25	□□□□□ -1.25
GGA1-222	ENST00000489772		A6NJY4	79 aa		7.25	□□□□□ -1.25
GGA1-222	ENST00000489772	C20orf78	Q9BR46	151 aa		7.25	□□□□□ -1.25
GGA1-222	ENST00000489772	TRBV24-1	A0A075B6N3	115 aa		7.24	□□□□□ -1.25
GGA1-222	ENST00000489772	C7orf77	A4D0Y5	90 aa		7.24	□□□□□ -1.25
GGA1-222	ENST00000489772	CLRN3	Q8NCR9	226 aa		7.24	□□□□□ -1.25
GGA1-222	ENST00000489772	OR5A1	Q8NGJ0	315 aa		7.24	□□□□□ -1.25
GGA1-222	ENST00000489772	KRTAP4-5	Q9BYR2	181 aa		7.24	□□□□□ -1.25
GGA1-222	ENST00000489772	TMEM218	A2RU14	115 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	EPM2A	B3EWF7	344 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772		D6R8Y8	96 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	TNFRSF6B	O95407	300 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	PPBP	P02775	128 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	PRSS1	P07477	247 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	SMAGP	Q0VAQ4	97 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	DGAT2L7P	Q6IED9	249 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	FAM30A	Q9NZY2	134 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	DNAH8	Q96JB1	4490 aa		7.23	□□□□□ -1.25
GGA1-222	ENST00000489772	GAGE12H	A6NDE8	117 aa		7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	TCAP	O15273	167 aa		7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	RPL32	P62910	135 aa	Known RBP	7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	HAMP	P81172	84 aa		7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	LINC01620	Q4KN68	170 aa		7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	MRPL52	Q86TS9	123 aa	Known RBP	7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	ORMDL3	Q8N138	153 aa		7.22	□□□□□ -1.25
GGA1-222	ENST00000489772	hDV102S1	A0JD36	115 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	PHOX2A	O14813	284 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	CFAP161	Q6P656	301 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	TMEM136	Q6ZRR5	245 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772		Q6ZSA8	131 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	ZNF664	Q8N3J9	261 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	TMEM18	Q96B42	140 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	CDC42SE2	Q9NRR3	84 aa		7.21	□□□□□ -1.25
GGA1-222	ENST00000489772	SMR3B	P02814	79 aa	Predicted RBP	7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	ADCYAP1	P18509	176 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	COMMD7	Q86VX2	200 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	IMMP2L	Q96T52	175 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	SMIM2	Q9BVW6	85 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	AP5S1	Q9NUS5	200 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	CSDC2	Q9Y534	153 aa	Known RBP	7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	FAT1	Q14517	4588 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	NPY	P01303	97 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	XCL1	P47992	114 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	SS18	Q15532	418 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	SEC11C	Q9BY50	192 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	KRTAP9-9	Q9BYP9	154 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	KRTAP9-4	Q9BYQ2	154 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	CTDSP1	Q9GZU7	261 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	UBE2D4	Q9Y2X8	147 aa		7.2	□□□□□ -1.26
GGA1-222	ENST00000489772	LINC00959	A0A1B0GUT2	108 aa		7.19	□□□□□ -1.26
GGA1-222	ENST00000489772	FAM229A	H3BQW9	127 aa		7.19	□□□□□ -1.26
GGA1-222	ENST00000489772	CNBP	P62633	177 aa	Known RBP	7.19	□□□□□ -1.26
GGA1-222	ENST00000489772		Q5VSD8	79 aa		7.19	□□□□□ -1.26
GGA1-222	ENST00000489772	PRELID3A	Q96N28	172 aa		7.19	□□□□□ -1.26
GGA1-222	ENST00000489772	LAMTOR2	Q9Y2Q5	125 aa		7.19	□□□□□ -1.26
GGA1-222	ENST00000489772	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	CCL25	O15444	150 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	RAB5A	P20339	215 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	FOXI1	Q12951	378 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	C9orf163	Q8N9P6	203 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	CHAC1	Q9BUX1	264 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	TIMM21	Q9BVV7	248 aa		7.18	□□□□□ -1.26
GGA1-222	ENST00000489772	TMEM238L	A0A1B0GVL6	79 aa		7.17	□□□□□ -1.26
GGA1-222	ENST00000489772	CD164L2	Q6UWJ8	174 aa		7.17	□□□□□ -1.26
GGA1-222	ENST00000489772	SCX	Q7RTU7	201 aa		7.17	□□□□□ -1.26
GGA1-222	ENST00000489772	C15orf56	Q8N910	161 aa		7.17	□□□□□ -1.26
GGA1-222	ENST00000489772	TRAV9-1	A0A075B6T8	112 aa		7.16	□□□□□ -1.26
GGA1-222	ENST00000489772	C1orf196	B1AJZ1	125 aa		7.16	□□□□□ -1.26
GGA1-222	ENST00000489772	S100P	P25815	95 aa		7.16	□□□□□ -1.26
GGA1-222	ENST00000489772	MAP1LC3A	Q9H492	121 aa		7.16	□□□□□ -1.26
GGA1-222	ENST00000489772	SPANXA1	Q9NS26	97 aa		7.16	□□□□□ -1.26
GGA1-222	ENST00000489772	IGHV3-64	A0A075B6Q5	118 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	TRAV13-1	A0A0B4J241	112 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	LOC389332	A0A1B0GUA5	103 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	PRSS47	A8MTI9	375 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	RPL39	P62891	51 aa	Known RBP	7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	HIGD2B	Q4VC39	106 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	RNASE13	Q5GAN3	156 aa	Known RBP	7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	SDIM1	Q6ZPB5	146 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772		Q6ZUT4	128 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	KRTAP19-1	Q8IUB9	90 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	CIRBP-AS1	Q8TBR5	109 aa		7.15	□□□□□ -1.26
GGA1-222	ENST00000489772	VPS13B	Q7Z7G8	4022 aa		7.15	□□□□□ -1.27
GGA1-222	ENST00000489772	SRRM2	Q9UQ35	2752 aa	Known RBP	7.14	□□□□□ -1.27
GGA1-222	ENST00000489772	IGHV1-58	A0A0C4DH39	117 aa		7.14	□□□□□ -1.27
GGA1-222	ENST00000489772	SLPI	P03973	132 aa		7.14	□□□□□ -1.27
GGA1-222	ENST00000489772	INAFM2	P0DMQ5	153 aa		7.14	□□□□□ -1.27
GGA1-222	ENST00000489772	C10orf91	Q5T1B1	145 aa		7.14	□□□□□ -1.27
GGA1-222	ENST00000489772	KRTAP4-8	A0A0G2JLE6	195 aa		7.13	□□□□□ -1.27
GGA1-222	ENST00000489772	PLA2G1B	P04054	148 aa	Known RBP	7.13	□□□□□ -1.27
GGA1-222	ENST00000489772	MAL	P21145	153 aa		7.13	□□□□□ -1.27
GGA1-222	ENST00000489772	IFI27	P40305	119 aa	Predicted RBP	7.13	□□□□□ -1.27
GGA1-222	ENST00000489772	MRPS36	P82909	103 aa	Known RBP	7.13	□□□□□ -1.27
GGA1-222	ENST00000489772	RHEB	Q15382	184 aa		7.13	□□□□□ -1.27
GGA1-222	ENST00000489772		Q8N8P6	123 aa		7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms