RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
SFXN3-207ENST00000489434 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
SFXN3-207ENST00000489434 A0A096LNI7 61 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
SFXN3-207ENST00000489434 BCL2P10415 239 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
SFXN3-207ENST00000489434 XCL1P47992 114 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 SPINK6Q6UWN8 80 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 OR5A1Q8NGJ0 315 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
SFXN3-207ENST00000489434 SMDT1Q9H4I9 107 aa7.47□□□□□ -1.21
SFXN3-207ENST00000489434 IGHV1-58A0A0C4DH39 117 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 I3L3M4 83 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
SFXN3-207ENST00000489434 PMCHP20382 165 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 BLOC1S1P78537 153 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 FOXI1Q12951 378 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 C12orf57Q99622 126 aa7.46□□□□□ -1.22
SFXN3-207ENST00000489434 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 S100PP25815 95 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 RAB5BP61020 215 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 SS18Q15532 418 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 Q6ZRP5 223 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
SFXN3-207ENST00000489434 SMCO4Q9NRQ5 59 aa7.45□□□□□ -1.22
SFXN3-207ENST00000489434 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
SFXN3-207ENST00000489434 CCL25O15444 150 aa7.44□□□□□ -1.22
SFXN3-207ENST00000489434 S100A6P06703 90 aa7.44□□□□□ -1.22
SFXN3-207ENST00000489434 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
SFXN3-207ENST00000489434 MRAP2Q96G30 205 aa7.44□□□□□ -1.22
SFXN3-207ENST00000489434 A8MWL6 223 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 SYCNQ0VAF6 134 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
SFXN3-207ENST00000489434 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
SFXN3-207ENST00000489434 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
SFXN3-207ENST00000489434 PEA15Q15121 130 aa7.42□□□□□ -1.22
SFXN3-207ENST00000489434 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
SFXN3-207ENST00000489434 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
SFXN3-207ENST00000489434 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 FAM231BA6NCW3 169 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 K7EN84 100 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 MALP21145 153 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 CAMPP49913 170 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 FOXA3P55318 350 aaPredicted RBP7.41□□□□□ -1.22
SFXN3-207ENST00000489434 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
SFXN3-207ENST00000489434 TSHBP01222 138 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 ESDP10768 282 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 PTTG1IPP53801 180 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
SFXN3-207ENST00000489434 ODF1Q14990 250 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 MRPL52Q86TS9 123 aaKnown RBP7.4□□□□□ -1.22
SFXN3-207ENST00000489434 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
SFXN3-207ENST00000489434 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
SFXN3-207ENST00000489434 COLCA2A8K830 154 aa7.39□□□□□ -1.23
SFXN3-207ENST00000489434 COX7A2LO14548 114 aa7.39□□□□□ -1.23
SFXN3-207ENST00000489434 AKR1D1P51857 326 aa7.39□□□□□ -1.23
SFXN3-207ENST00000489434 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 MT-ND6P03923 174 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 FCER1GP30273 86 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 RHEBQ15382 184 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 CT83Q5H943 113 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 FAM231DQ6ZW35 169 aa7.38□□□□□ -1.23
SFXN3-207ENST00000489434 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 PCP4L1A6NKN8 68 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 APOMO95445 188 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 TMEM191AQ9H0A3 160 aa7.37□□□□□ -1.23
SFXN3-207ENST00000489434 VCYO14598 125 aa7.36□□□□□ -1.23
SFXN3-207ENST00000489434 PPP1R17O96001 155 aa7.36□□□□□ -1.23
SFXN3-207ENST00000489434 ADCYAP1P18509 176 aa7.36□□□□□ -1.23
SFXN3-207ENST00000489434 CEBPGP53567 150 aa7.36□□□□□ -1.23
SFXN3-207ENST00000489434 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
SFXN3-207ENST00000489434 LBHQ53QV2 105 aaPredicted RBP7.36□□□□□ -1.23
SFXN3-207ENST00000489434 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
SFXN3-207ENST00000489434 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
SFXN3-207ENST00000489434 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
SFXN3-207ENST00000489434 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
SFXN3-207ENST00000489434 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
SFXN3-207ENST00000489434 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
SFXN3-207ENST00000489434 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.23
SFXN3-207ENST00000489434 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
SFXN3-207ENST00000489434 RAB4AP20338 218 aa7.34□□□□□ -1.23
SFXN3-207ENST00000489434 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
SFXN3-207ENST00000489434 C9orf116Q5BN46 136 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms