RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 SRSF3P84103 164 aaKnown RBP5.46□□□□□ -1.54
COL17A1-207ENST00000488320 MAP1LC3BQ9GZQ8 125 aa5.46□□□□□ -1.54
COL17A1-207ENST00000488320 BORCS7-ASMTA0A0B4J1R7 106 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 PAGE4O60829 102 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 IGLC6P0CF74 106 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 GATD1Q8NB37 220 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 IMMP2LQ96T52 175 aa5.45□□□□□ -1.54
COL17A1-207ENST00000488320 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 F2Z2F3 143 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 ZNF861PO60384 105 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 ESDP10768 282 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 CRYGAP11844 174 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 RPL7L1Q6DKI1 246 aaKnown RBP5.44□□□□□ -1.54
COL17A1-207ENST00000488320 LYZL1Q6UWQ5 148 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 RPL39LQ96EH5 51 aaKnown RBP5.44□□□□□ -1.54
COL17A1-207ENST00000488320 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 RPP21Q9H633 154 aaKnown RBP5.44□□□□□ -1.54
COL17A1-207ENST00000488320 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
COL17A1-207ENST00000488320 XKRY2A2RUG3 117 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 I3L3M4 83 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 M0QXV9 152 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 PFDN1O60925 122 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 SPAG11BQ08648 103 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 TWIST1Q15672 202 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 TMUB2Q71RG4 321 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
COL17A1-207ENST00000488320 SDHAF1A6NFY7 115 aa5.42□□□□□ -1.54
COL17A1-207ENST00000488320 IFNA1P01562 189 aa5.42□□□□□ -1.54
COL17A1-207ENST00000488320 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
COL17A1-207ENST00000488320 MRAP2Q96G30 205 aa5.42□□□□□ -1.54
COL17A1-207ENST00000488320 ALG5Q9Y673 324 aa5.42□□□□□ -1.54
COL17A1-207ENST00000488320 A0A087X002 238 aa5.41□□□□□ -1.54
COL17A1-207ENST00000488320 A0A1B0GV50 99 aa5.41□□□□□ -1.54
COL17A1-207ENST00000488320 A6NJY4 79 aa5.41□□□□□ -1.54
COL17A1-207ENST00000488320 G3V3Q6 166 aa5.41□□□□□ -1.54
COL17A1-207ENST00000488320 SMIM15Q7Z3B0 74 aa5.41□□□□□ -1.54
COL17A1-207ENST00000488320 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
COL17A1-207ENST00000488320 TRAV13-1A0A0B4J241 112 aa5.4□□□□□ -1.54
COL17A1-207ENST00000488320 NDUFA1O15239 70 aa5.4□□□□□ -1.54
COL17A1-207ENST00000488320 RPL35P42766 123 aaKnown RBP5.4□□□□□ -1.54
COL17A1-207ENST00000488320 TMEM241Q24JQ0 296 aa5.4□□□□□ -1.54
COL17A1-207ENST00000488320 MARVELD1Q9BSK0 173 aa5.4□□□□□ -1.54
COL17A1-207ENST00000488320 TEX261Q6UWH6 196 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 SFT2D1Q8WV19 159 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 TMEM242Q9NWH2 141 aa5.39□□□□□ -1.55
COL17A1-207ENST00000488320 F8WDY8 70 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 NUPR1O60356 82 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 TSHBP01222 138 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 RNASE13Q5GAN3 156 aaKnown RBP5.38□□□□□ -1.55
COL17A1-207ENST00000488320 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 MRPL52Q86TS9 123 aaKnown RBP5.38□□□□□ -1.55
COL17A1-207ENST00000488320 C9orf62Q8N4C0 152 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 KCNRGQ8N5I3 272 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
COL17A1-207ENST00000488320 C7orf77A4D0Y5 90 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 SMAGPQ0VAQ4 97 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 CENPWQ5EE01 88 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 KRTAP7-1Q8IUC3 87 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 S100ZQ8WXG8 99 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 CTDSP1Q9GZU7 261 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 ST20Q9HBF5 79 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 ANAPC11Q9NYG5 84 aa5.37□□□□□ -1.55
COL17A1-207ENST00000488320 UPK1BO75841 260 aa5.36□□□□□ -1.55
COL17A1-207ENST00000488320 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
COL17A1-207ENST00000488320 FOXA3P55318 350 aaPredicted RBP5.36□□□□□ -1.55
COL17A1-207ENST00000488320 FAM210AQ96ND0 272 aa5.36□□□□□ -1.55
COL17A1-207ENST00000488320 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
COL17A1-207ENST00000488320 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
COL17A1-207ENST00000488320 FXYD6-FXYD2A0A087WZ82 144 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 TRBV6-5A0A0K0K1A5 114 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 FCER1GP30273 86 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 CTRLP40313 264 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 GNG4P50150 75 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 Q5BKY6 102 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 FAM213BQ8TBF2 198 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 RNASE7Q9H1E1 156 aaKnown RBP5.35□□□□□ -1.55
COL17A1-207ENST00000488320 BIN3Q9NQY0 253 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 CYTL1Q9NRR1 136 aa5.35□□□□□ -1.55
COL17A1-207ENST00000488320 RAB19A4D1S5 217 aa5.34□□□□□ -1.55
COL17A1-207ENST00000488320 KRTAP13-2Q52LG2 175 aa5.34□□□□□ -1.55
COL17A1-207ENST00000488320 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
COL17A1-207ENST00000488320 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
COL17A1-207ENST00000488320 MBD3L1Q8WWY6 194 aa5.34□□□□□ -1.55
COL17A1-207ENST00000488320 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
COL17A1-207ENST00000488320 IGKV2D-26A0A0A0MRZ7 120 aa5.33□□□□□ -1.56
COL17A1-207ENST00000488320 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
COL17A1-207ENST00000488320 IFITM3Q01628 133 aa5.33□□□□□ -1.56
COL17A1-207ENST00000488320 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms