RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ERCC6L2Q5T890 1561 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 POLR1AO95602 1720 aaPredicted RBP2.48□□□□□ -2.01
VPS8-224ENST00000488255 NHSQ6T4R5 1651 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 LTBP4Q8N2S1 1624 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 ANKRD36CQ5JPF3 1778 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 TMSB15BA0A087X1C1 80 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 TRAV12-1A0A0B4J245 112 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 A0A1B0GUT8 65 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 PLNP26678 52 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 Q5W150 140 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 MYO9BQ13459 2157 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 BRWD3Q6RI45 1802 aa2.47□□□□□ -2.01
VPS8-224ENST00000488255 FAM223BA6NKX1 122 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 CLPSP04118 112 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 IFI6P09912 130 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 C1orf137Q5JT78 98 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 NCBP2-AS2Q69YL0 99 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 WFDC6Q9BQY6 131 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 S4R3C0 116 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 USP54Q70EL1 1684 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 SVILO95425 2214 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 STRCP1A6NGW2 1772 aa2.46□□□□□ -2.02
VPS8-224ENST00000488255 PLXNA3P51805 1871 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 TRIOBPQ9H2D6 2365 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 SLX4Q8IY92 1834 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 IGKV1D-42A0A075B6H8 117 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 IGKV1D-37A0A075B6S9 117 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 IGKV1OR2-108A0A075B7D4 117 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 HMGN4O00479 90 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 PPYP01298 95 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 FCER1GP30273 86 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 SPAG11BQ08648 103 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 FAM229BQ4G0N7 80 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 Q5VV11 94 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 C10orf113Q5VZT2 155 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 SPAG11AQ6PDA7 123 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
VPS8-224ENST00000488255 C20orf166-AS1Q96NR2 134 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 RNF5Q99942 180 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 UBL5Q9BZL1 73 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 PSENENQ9NZ42 101 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 LOC285556D6RIA3 1793 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 PCNX2A6NKB5 2137 aa2.45□□□□□ -2.02
VPS8-224ENST00000488255 PLXNB3Q9ULL4 1909 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 C3P01024 1663 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 LAMB2P55268 1798 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 PLXNA2O75051 1894 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 TOP2BQ02880 1626 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 PAPPAQ13219 1627 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 A8MUU9 505 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 ZNF22P17026 224 aaPredicted RBP2.44□□□□□ -2.02
VPS8-224ENST00000488255 ZNF833PQ6ZTB9 187 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 ADM2Q7Z4H4 148 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 BPESC1Q9GZL8 116 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 CYSTM1Q9H1C7 97 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
VPS8-224ENST00000488255 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
VPS8-224ENST00000488255 FAM208AQ9UK61 1670 aaKnown RBP2.44□□□□□ -2.02
VPS8-224ENST00000488255 MUC4Q99102 2169 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 TRAV40A0A0B4J280 105 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 A0A1B0GU33 70 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 ODF3BA8MYP8 253 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 PLXNB1O43157 2135 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 MGPP08493 103 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 ZCCHC23Q6ZST2 131 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 HEATR1Q9H583 2144 aaKnown RBP2.43□□□□□ -2.02
VPS8-224ENST00000488255 NDUFA4L2Q9NRX3 87 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 MGAMO43451 1857 aa2.43□□□□□ -2.02
VPS8-224ENST00000488255 KIF21BO75037 1637 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 ALKQ9UM73 1620 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 COL5A3P25940 1745 aaPredicted RBP2.42□□□□□ -2.02
VPS8-224ENST00000488255 NUP188Q5SRE5 1749 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 TSC2P49815 1807 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 TUBGCP6Q96RT7 1819 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 MROH2BQ7Z745 1585 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 A0A0J9YX75 114 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 A0A0J9YY99 117 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 SMIM27A0A1W2PRY6 76 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 PDE6GP18545 87 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 SPINT3P49223 89 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 SPINT4Q6UDR6 99 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 Q9BRP9 147 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 LINC00846Q9NV44 126 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 UBR1Q8IWV7 1749 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.42□□□□□ -2.02
VPS8-224ENST00000488255 LRRC37A3O60309 1634 aa2.42□□□□□ -2.02
VPS8-224ENST00000488255 ABCC8Q09428 1581 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 CD163L1Q9NR16 1453 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 LCTP09848 1927 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 TRBV6-5A0A0K0K1A5 114 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 B4DSR2 109 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 F8VRH5 84 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 K7EMI3 77 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms