RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 BTF3L4Q96K17 158 aa7.27□□□□□ -1.25
NIPAL3-207ENST00000488155 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 BORCS7Q96B45 105 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
NIPAL3-207ENST00000488155 FAM231BA6NCW3 169 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 KRTAP29-1A8MX34 341 aaPredicted RBP7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 APCSP02743 223 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 SLPIP03973 132 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 RPL37AP61513 92 aaKnown RBP7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 C21orf62-AS1Q17RA5 79 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 SDIM1Q6ZPB5 146 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
NIPAL3-207ENST00000488155 TRAV9-1A0A075B6T8 112 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 HIGD1CA8MV81 97 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 PMCHP20382 165 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 RIGQ13278 110 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
NIPAL3-207ENST00000488155 COLCA2A8K830 154 aa7.23□□□□□ -1.25
NIPAL3-207ENST00000488155 FGF6P10767 208 aa7.23□□□□□ -1.25
NIPAL3-207ENST00000488155 HNRNPA3P51991 378 aaKnown RBP7.23□□□□□ -1.25
NIPAL3-207ENST00000488155 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
NIPAL3-207ENST00000488155 CHCHD10Q8WYQ3 142 aaPredicted RBP7.23□□□□□ -1.25
NIPAL3-207ENST00000488155 TRBV24-1A0A075B6N3 115 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 IGHV3-64A0A075B6Q5 118 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 I3L3M4 83 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 NCR2O95944 276 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 RPS10P46783 165 aaKnown RBP7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 MAJINQ3KP22 176 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 ST20Q9HBF5 79 aa7.22□□□□□ -1.25
NIPAL3-207ENST00000488155 A0A1B0GUT8 65 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 SMKR1H3BMG3 65 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 S100A8P05109 93 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 RAB5AP20339 215 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 CAMPP49913 170 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 COX19Q49B96 90 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 RNF185Q96GF1 192 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 YPEL4Q96NS1 127 aa7.21□□□□□ -1.26
NIPAL3-207ENST00000488155 A0A087WYN8 130 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 TSHBP01222 138 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 RAB4AP20338 218 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 XCL1P47992 114 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 COX6A2Q02221 97 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 ATP5L2Q7Z4Y8 100 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 TMEM101Q96IK0 257 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
NIPAL3-207ENST00000488155 IGKV2-24A0A0C4DH68 120 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 TRBV6-5A0A0K0K1A5 114 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 A0A1B0GW15 77 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 H7C423 109 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 ESDP10768 282 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 HBBP68871 147 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 LINC00526Q96FQ7 95 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 TRAPPC1Q9Y5R8 145 aa7.19□□□□□ -1.26
NIPAL3-207ENST00000488155 CCL25O15444 150 aa7.18□□□□□ -1.26
NIPAL3-207ENST00000488155 POLR2KP53803 58 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-207ENST00000488155 FOXI1Q12951 378 aa7.18□□□□□ -1.26
NIPAL3-207ENST00000488155 CIRBPQ14011 172 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-207ENST00000488155 MRAP2Q96G30 205 aa7.18□□□□□ -1.26
NIPAL3-207ENST00000488155 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 C1orf196B1AJZ1 125 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 OXTP01178 125 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 ZNF25P17030 456 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 FABP9Q0Z7S8 132 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 GNB1LQ9BYB4 327 aa7.17□□□□□ -1.26
NIPAL3-207ENST00000488155 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 A0A1B0GXF2 115 aa7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 MT-ND6P03923 174 aa7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
NIPAL3-207ENST00000488155 TRBV27A0A0K0K1C4 114 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 TRGC2P03986 189 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 FCER1GP30273 86 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 SS18Q15532 418 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 NRACQ8N912 160 aa7.15□□□□□ -1.26
NIPAL3-207ENST00000488155 A0A096LNI7 61 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 VCYO14598 125 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 PHOX2AO14813 284 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 RAB5BP61020 215 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 SUMO2P61956 95 aaKnown RBP7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 STPG4Q8N801 248 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms