RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
NUP188-207ENST00000487952 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
NUP188-207ENST00000487952 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
NUP188-207ENST00000487952 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 REG3AQ06141 175 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 Q6ZN92 141 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 Q6ZUT4 128 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 NFE4Q86UQ8 179 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 RMI2Q96E14 147 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 SCGB3A1Q96QR1 104 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 LYSTQ99698 3801 aa9.48□□□□□ -0.89
NUP188-207ENST00000487952 MRPS36P82909 103 aaKnown RBP9.47□□□□□ -0.89
NUP188-207ENST00000487952 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
NUP188-207ENST00000487952 VPS13DQ5THJ4 4388 aa9.46□□□□□ -0.89
NUP188-207ENST00000487952 NDUFA6P56556 154 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 MIAQ16674 131 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
NUP188-207ENST00000487952 ERASQ7Z444 233 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
NUP188-207ENST00000487952 IGLV4-3A0A075B6K6 122 aa9.45□□□□□ -0.9
NUP188-207ENST00000487952 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
NUP188-207ENST00000487952 NPSP0C0P6 89 aa9.45□□□□□ -0.9
NUP188-207ENST00000487952 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
NUP188-207ENST00000487952 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
NUP188-207ENST00000487952 OPRPNQ99935 248 aaPredicted RBP9.45□□□□□ -0.9
NUP188-207ENST00000487952 A0A096LNJ9 63 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 IFITM10A6NMD0 228 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
NUP188-207ENST00000487952 PSCAO43653 123 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 ATP5LO75964 103 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 LINC00310P59036 64 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 SS18Q15532 418 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 FAM19A2Q8N3H0 131 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 VCX2Q9H322 139 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 COX11Q9Y6N1 276 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 DNAH1Q9P2D7 4330 aa9.44□□□□□ -0.9
NUP188-207ENST00000487952 S100A6P06703 90 aa9.43□□□□□ -0.9
NUP188-207ENST00000487952 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
NUP188-207ENST00000487952 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
NUP188-207ENST00000487952 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
NUP188-207ENST00000487952 NUPR1O60356 82 aa9.42□□□□□ -0.9
NUP188-207ENST00000487952 PDZD11Q5EBL8 140 aa9.42□□□□□ -0.9
NUP188-207ENST00000487952 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
NUP188-207ENST00000487952 CCL25O15444 150 aa9.41□□□□□ -0.9
NUP188-207ENST00000487952 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
NUP188-207ENST00000487952 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
NUP188-207ENST00000487952 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
NUP188-207ENST00000487952 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
NUP188-207ENST00000487952 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 FABP4P15090 132 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 PMVKQ15126 192 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 ZC2HC1BQ5TFG8 222 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 AMELXQ99217 191 aa9.39□□□□□ -0.91
NUP188-207ENST00000487952 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
NUP188-207ENST00000487952 PRSS1P07477 247 aa9.38□□□□□ -0.91
NUP188-207ENST00000487952 XCL1P47992 114 aa9.38□□□□□ -0.91
NUP188-207ENST00000487952 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
NUP188-207ENST00000487952 KMT2AQ03164 3969 aa9.37□□□□□ -0.91
NUP188-207ENST00000487952 LINC00173Q6ZV60 143 aa9.37□□□□□ -0.91
NUP188-207ENST00000487952 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
NUP188-207ENST00000487952 KMT2CQ8NEZ4 4911 aaKnown RBP9.36□□□□□ -0.91
NUP188-207ENST00000487952 RTL8CO15255 209 aa9.36□□□□□ -0.91
NUP188-207ENST00000487952 UBE2D1P51668 147 aa9.36□□□□□ -0.91
NUP188-207ENST00000487952 SEC11AP67812 179 aa9.36□□□□□ -0.91
NUP188-207ENST00000487952 CD164L2Q6UWJ8 174 aa9.36□□□□□ -0.91
NUP188-207ENST00000487952 PACRGQ96M98 296 aaPredicted RBP9.36□□□□□ -0.91
NUP188-207ENST00000487952 CST9LQ9H4G1 147 aa9.36□□□□□ -0.91
NUP188-207ENST00000487952 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
NUP188-207ENST00000487952 S100A2P29034 98 aa9.35□□□□□ -0.91
NUP188-207ENST00000487952 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
NUP188-207ENST00000487952 GEMIN7Q9H840 131 aaKnown RBP9.35□□□□□ -0.91
NUP188-207ENST00000487952 H0Y8G0 127 aa9.34□□□□□ -0.91
NUP188-207ENST00000487952 EREGO14944 169 aa9.34□□□□□ -0.91
NUP188-207ENST00000487952 KRTAP26-1Q6PEX3 210 aa9.34□□□□□ -0.91
NUP188-207ENST00000487952 MAP1LC3CQ9BXW4 147 aa9.34□□□□□ -0.91
NUP188-207ENST00000487952 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
NUP188-207ENST00000487952 COX7A2LO14548 114 aa9.33□□□□□ -0.92
NUP188-207ENST00000487952 HERVK_113P63121 156 aa9.33□□□□□ -0.92
NUP188-207ENST00000487952 FOXI1Q12951 378 aa9.33□□□□□ -0.92
NUP188-207ENST00000487952 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
NUP188-207ENST00000487952 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
NUP188-207ENST00000487952 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
NUP188-207ENST00000487952 LECT2O14960 151 aa9.32□□□□□ -0.92
NUP188-207ENST00000487952 MALP21145 153 aa9.32□□□□□ -0.92
NUP188-207ENST00000487952 SNRPEP62304 92 aaKnown RBP9.32□□□□□ -0.92
NUP188-207ENST00000487952 TNP2Q05952 138 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms