RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CSPG4Q6UVK1 2322 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 MTORP42345 2549 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 TRBV24-1A0A075B6N3 115 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 NBPF19A0A087WUL8 3843 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 A0A1B0GUT8 65 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 A0A1B0GXF2 115 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 SMIM27A0A1W2PRY6 76 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 FABP5P3A8MUU1 101 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 H3BMM0 161 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 TRGC2P03986 189 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 IGLC6P0CF74 106 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 SMIM17P0DL12 118 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 S100A2P29034 98 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 SRIP30626 198 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 RNASE4P34096 147 aaKnown RBP1.74□□□□□ -2.13
LINC00888-204ENST00000487386 INSL3P51460 131 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 AKR1D1P51857 326 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 FOXA3P55318 350 aaPredicted RBP1.74□□□□□ -2.13
LINC00888-204ENST00000487386 FABP9Q0Z7S8 132 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 RBMY1FQ15415 496 aaKnown RBP1.74□□□□□ -2.13
LINC00888-204ENST00000487386 IQCJQ1A5X6 159 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 DEFB135Q30KP9 77 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 MORN3Q6PF18 240 aaPredicted RBP1.74□□□□□ -2.13
LINC00888-204ENST00000487386 LYZL1Q6UWQ5 148 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 AMTNQ6UX39 209 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 AMN1Q8IY45 258 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 DEFB125Q8N687 156 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 NUP35Q8NFH5 326 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 KCNS1Q96KK3 526 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 YPEL4Q96NS1 127 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 AGPAT4-IT1Q9H0P7 198 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 TMEM242Q9NWH2 141 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 MRPL16Q9NX20 251 aaKnown RBP1.74□□□□□ -2.13
LINC00888-204ENST00000487386 KLF12Q9Y4X4 402 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 PHLDA3Q9Y5J5 127 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 ACANP16112 2415 aa1.74□□□□□ -2.13
LINC00888-204ENST00000487386 SVEP1Q4LDE5 3571 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 LOC102724200A0A096LPH7 203 aaPredicted RBP1.73□□□□□ -2.13
LINC00888-204ENST00000487386 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 IGHV3-73A0A0B4J1V6 119 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 TRAV26-2A0A0B4J265 109 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 A0A1B0GW15 77 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 A0A1W2PNN7 141 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 D6R8Y8 96 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 SMKR1H3BMG3 65 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BKO60814 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HSBP1O75506 76 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 IGHV3-53P01767 116 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BJP06899 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 RNASE3P12724 160 aaKnown RBP1.73□□□□□ -2.13
LINC00888-204ENST00000487386 EVI2AP22794 236 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BOP23527 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BBP33778 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 EMP1P54849 157 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 NDUFA6P56556 154 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BDP58876 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BCP62807 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 RBX1P62877 108 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST2H2BEQ16778 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 RRN3P1Q2M238 152 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.73□□□□□ -2.13
LINC00888-204ENST00000487386 RASL11AQ6T310 242 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 Q6ZQT7 251 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 TMEM136Q6ZRR5 245 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 FA2HQ7L5A8 372 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 ZNF664Q8N3J9 261 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 TMEM263Q8WUH6 116 aaKnown RBP1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BHQ93079 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 FAM19A4Q96LR4 140 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 LINC01587Q99440 93 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BNQ99877 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 HIST1H2BMQ99879 126 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 C20orf144Q9BQM9 153 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 MAP1LC3AQ9H492 121 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 DPH3P1Q9H4G8 78 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 TUBA4BQ9H853 241 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 RETNQ9HD89 108 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 ITPR2Q14571 2701 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 VPS13CQ709C8 3753 aa1.73□□□□□ -2.13
LINC00888-204ENST00000487386 C2CD3Q4AC94 2353 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 TRGV2A0A075B6R0 118 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 A0A0J9YXV3 536 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 A8MTW9 85 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 F2Z2F3 143 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 H0Y8G0 127 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 CRXO43186 299 aaPredicted RBP1.72□□□□□ -2.13
LINC00888-204ENST00000487386 NPYP01303 97 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 OR5AL1P0C617 328 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 FABP4P15090 132 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 NTF3P20783 257 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 CRIP1P50238 77 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 CMC4P56277 68 aaPredicted RBP1.72□□□□□ -2.13
LINC00888-204ENST00000487386 OR10J3Q5JRS4 329 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 BAGE3Q86Y29 109 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 ORMDL3Q8N138 153 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 C18orf32Q8TCD1 76 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 MRAP2Q96G30 205 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 PACRGQ96M98 296 aaPredicted RBP1.72□□□□□ -2.13
LINC00888-204ENST00000487386 PRELID3AQ96N28 172 aa1.72□□□□□ -2.13
LINC00888-204ENST00000487386 GNB1LQ9BYB4 327 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms