RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
LIMS3-205ENST00000487150 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.86
LIMS3-205ENST00000487150 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
LIMS3-205ENST00000487150 CCL25O15444 150 aa9.7□□□□□ -0.86
LIMS3-205ENST00000487150 Q8N8P6 123 aa9.7□□□□□ -0.86
LIMS3-205ENST00000487150 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
LIMS3-205ENST00000487150 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 BAALCQ8WXS3 180 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 CDC42SE2Q9NRR3 84 aa9.69□□□□□ -0.86
LIMS3-205ENST00000487150 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
LIMS3-205ENST00000487150 SS18Q15532 418 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 CFAP161Q6P656 301 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 MRPL18Q9H0U6 180 aaKnown RBP9.68□□□□□ -0.86
LIMS3-205ENST00000487150 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
LIMS3-205ENST00000487150 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
LIMS3-205ENST00000487150 FABP9Q0Z7S8 132 aa9.67□□□□□ -0.86
LIMS3-205ENST00000487150 MAPKAPK5-AS1Q8N8E1 139 aa9.67□□□□□ -0.86
LIMS3-205ENST00000487150 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 LECT2O14960 151 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 NPSP0C0P6 89 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 KIAA1644Q3SXP7 199 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 SLC7A5P1Q8MH63 180 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 PRSS3P2Q8NHM4 247 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
LIMS3-205ENST00000487150 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 TRAPPC1Q9Y5R8 145 aa9.66□□□□□ -0.86
LIMS3-205ENST00000487150 LINC00959A0A1B0GUT2 108 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 GCSHP23434 173 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 PAPPA-AS1Q5QFB9 102 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 KRTAP26-1Q6PEX3 210 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 Q6ZN92 141 aa9.65□□□□□ -0.86
LIMS3-205ENST00000487150 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
LIMS3-205ENST00000487150 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
LIMS3-205ENST00000487150 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
LIMS3-205ENST00000487150 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
LIMS3-205ENST00000487150 WFDC2Q14508 124 aa9.64□□□□□ -0.87
LIMS3-205ENST00000487150 Q6ZUT4 128 aa9.64□□□□□ -0.87
LIMS3-205ENST00000487150 DNAH11Q96DT5 4516 aa9.64□□□□□ -0.87
LIMS3-205ENST00000487150 XCL1P47992 114 aa9.63□□□□□ -0.87
LIMS3-205ENST00000487150 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
LIMS3-205ENST00000487150 C2orf66Q6UXQ4 117 aa9.63□□□□□ -0.87
LIMS3-205ENST00000487150 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
LIMS3-205ENST00000487150 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
LIMS3-205ENST00000487150 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
LIMS3-205ENST00000487150 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
LIMS3-205ENST00000487150 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
LIMS3-205ENST00000487150 PKD1P98161 4303 aa9.61□□□□□ -0.87
LIMS3-205ENST00000487150 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
LIMS3-205ENST00000487150 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
LIMS3-205ENST00000487150 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
LIMS3-205ENST00000487150 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 RAB5BP61020 215 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 FOXI1Q12951 378 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 TEX43Q6ZNM6 134 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 CBLN2Q8IUK8 224 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 YPEL4Q96NS1 127 aa9.6□□□□□ -0.87
LIMS3-205ENST00000487150 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 COX7A2LO14548 114 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 MALP21145 153 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
LIMS3-205ENST00000487150 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
LIMS3-205ENST00000487150 APOMO95445 188 aa9.58□□□□□ -0.88
LIMS3-205ENST00000487150 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
LIMS3-205ENST00000487150 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
LIMS3-205ENST00000487150 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
LIMS3-205ENST00000487150 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
LIMS3-205ENST00000487150 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
LIMS3-205ENST00000487150 PRSS1P07477 247 aa9.57□□□□□ -0.88
LIMS3-205ENST00000487150 ERASQ7Z444 233 aa9.57□□□□□ -0.88
LIMS3-205ENST00000487150 VCX2Q9H322 139 aa9.57□□□□□ -0.88
LIMS3-205ENST00000487150 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
LIMS3-205ENST00000487150 FUSP35637 526 aaKnown RBP eCLIP9.56□□□□□ -0.88
LIMS3-205ENST00000487150 SEC11AP67812 179 aa9.56□□□□□ -0.88
LIMS3-205ENST00000487150 C18orf32Q8TCD1 76 aa9.56□□□□□ -0.88
LIMS3-205ENST00000487150 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
LIMS3-205ENST00000487150 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
LIMS3-205ENST00000487150 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
LIMS3-205ENST00000487150 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
LIMS3-205ENST00000487150 LINC00614P0C842 121 aa9.54□□□□□ -0.88
LIMS3-205ENST00000487150 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
LIMS3-205ENST00000487150 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
LIMS3-205ENST00000487150 AMELXQ99217 191 aa9.53□□□□□ -0.88
LIMS3-205ENST00000487150 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
LIMS3-205ENST00000487150 LRP1BQ9NZR2 4599 aa9.53□□□□□ -0.88
LIMS3-205ENST00000487150 IGHV3-64A0A075B6Q5 118 aa9.52□□□□□ -0.89
LIMS3-205ENST00000487150 HBDP02042 147 aa9.52□□□□□ -0.89
LIMS3-205ENST00000487150 UBE2D1P51668 147 aa9.52□□□□□ -0.89
LIMS3-205ENST00000487150 HIGD2BQ4VC39 106 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms