RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
COL1A1-207ENST00000486572 LAMTOR2Q9Y2Q5 125 aa11.9□□□□□ -0.5
COL1A1-207ENST00000486572 S100PP25815 95 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 RHEBQ15382 184 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 TMEM18Q96B42 140 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 UBE2D4Q9Y2X8 147 aa11.89□□□□□ -0.51
COL1A1-207ENST00000486572 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
COL1A1-207ENST00000486572 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
COL1A1-207ENST00000486572 PRSS1P07477 247 aa11.88□□□□□ -0.51
COL1A1-207ENST00000486572 XGP55808 180 aa11.88□□□□□ -0.51
COL1A1-207ENST00000486572 ZNF664Q8N3J9 261 aa11.88□□□□□ -0.51
COL1A1-207ENST00000486572 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
COL1A1-207ENST00000486572 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-207ENST00000486572 APOBP04114 4563 aaKnown RBP11.87□□□□□ -0.51
COL1A1-207ENST00000486572 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
COL1A1-207ENST00000486572 HSPG2P98160 4391 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
COL1A1-207ENST00000486572 RAB5AP20339 215 aa11.85□□□□□ -0.51
COL1A1-207ENST00000486572 Q8N1X5 172 aa11.85□□□□□ -0.51
COL1A1-207ENST00000486572 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
COL1A1-207ENST00000486572 XCL1P47992 114 aa11.84□□□□□ -0.51
COL1A1-207ENST00000486572 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
COL1A1-207ENST00000486572 SS18Q15532 418 aa11.84□□□□□ -0.51
COL1A1-207ENST00000486572 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
COL1A1-207ENST00000486572 LOC389332A0A1B0GUA5 103 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 CCL25O15444 150 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 FOXI1Q12951 378 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 NDUFA5Q16718 116 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 Q6ZSA8 131 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 Q6ZUT4 128 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
COL1A1-207ENST00000486572 APOC3P02656 99 aa11.82□□□□□ -0.52
COL1A1-207ENST00000486572 HAMPP81172 84 aa11.82□□□□□ -0.52
COL1A1-207ENST00000486572 RNASE13Q5GAN3 156 aaKnown RBP11.82□□□□□ -0.52
COL1A1-207ENST00000486572 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
COL1A1-207ENST00000486572 C15orf56Q8N910 161 aa11.82□□□□□ -0.52
COL1A1-207ENST00000486572 COX19Q49B96 90 aa11.81□□□□□ -0.52
COL1A1-207ENST00000486572 Q8N8P6 123 aa11.81□□□□□ -0.52
COL1A1-207ENST00000486572 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
COL1A1-207ENST00000486572 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
COL1A1-207ENST00000486572 SVBPQ8N300 66 aa11.8□□□□□ -0.52
COL1A1-207ENST00000486572 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
COL1A1-207ENST00000486572 C1orf196B1AJZ1 125 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 SNAPINO95295 136 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 KIAA1644Q3SXP7 199 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 CD164L2Q6UWJ8 174 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
COL1A1-207ENST00000486572 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
COL1A1-207ENST00000486572 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
COL1A1-207ENST00000486572 K7EMI3 77 aa11.78□□□□□ -0.52
COL1A1-207ENST00000486572 MT-ND6P03923 174 aa11.78□□□□□ -0.52
COL1A1-207ENST00000486572 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-207ENST00000486572 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
COL1A1-207ENST00000486572 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-207ENST00000486572 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-207ENST00000486572 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
COL1A1-207ENST00000486572 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.53
COL1A1-207ENST00000486572 FAM104AQ969W3 186 aa11.77□□□□□ -0.53
COL1A1-207ENST00000486572 OPRPNQ99935 248 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-207ENST00000486572 PYGO1Q9Y3Y4 419 aa11.76□□□□□ -0.53
COL1A1-207ENST00000486572 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
COL1A1-207ENST00000486572 SMR3BP02814 79 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-207ENST00000486572 SLPIP03973 132 aa11.75□□□□□ -0.53
COL1A1-207ENST00000486572 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
COL1A1-207ENST00000486572 PCLOQ9Y6V0 5065 aa11.75□□□□□ -0.53
COL1A1-207ENST00000486572 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
COL1A1-207ENST00000486572 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
COL1A1-207ENST00000486572 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
COL1A1-207ENST00000486572 SCXQ7RTU7 201 aa11.74□□□□□ -0.53
COL1A1-207ENST00000486572 CHAC1Q9BUX1 264 aa11.74□□□□□ -0.53
COL1A1-207ENST00000486572 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
COL1A1-207ENST00000486572 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
COL1A1-207ENST00000486572 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
COL1A1-207ENST00000486572 COX7A2LO14548 114 aa11.73□□□□□ -0.53
COL1A1-207ENST00000486572 ALKBH7Q9BT30 221 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-207ENST00000486572 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 MALP21145 153 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 FABP9Q0Z7S8 132 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 Q5VSD8 79 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 TMEM141Q96I45 108 aa11.72□□□□□ -0.53
COL1A1-207ENST00000486572 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
COL1A1-207ENST00000486572 G0S2P27469 103 aa11.7□□□□□ -0.54
COL1A1-207ENST00000486572 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
COL1A1-207ENST00000486572 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 FAM229AH3BQW9 127 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 ZNF561-AS1K7EIQ3 104 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 NPSP0C0P6 89 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 Q6ZN92 141 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 TEX43Q6ZNM6 134 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
COL1A1-207ENST00000486572 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms