RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 LINC01549A6NIU2 74 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 NUPR1O60356 82 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 SPART-AS1P0CW21 52 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
USP41-204ENST00000486536 G0S2P27469 103 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
USP41-204ENST00000486536 EMP1P54849 157 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 ORMDL2Q53FV1 153 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 PDZD11Q5EBL8 140 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 HIST1H2BLQ99880 126 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 TMEM70Q9BUB7 260 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 SMIM2Q9BVW6 85 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 C11orf68Q9H3H3 251 aaKnown RBP4.17□□□□□ -1.74
USP41-204ENST00000486536 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
USP41-204ENST00000486536 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
USP41-204ENST00000486536 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
USP41-204ENST00000486536 IGHV3-73A0A0B4J1V6 119 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 FABP4P15090 132 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 RHOHQ15669 191 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 DEFB121Q5J5C9 76 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 RPL39LQ96EH5 51 aaKnown RBP4.16□□□□□ -1.74
USP41-204ENST00000486536 KIR2DL4Q99706 377 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 TM2D3Q9BRN9 247 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
USP41-204ENST00000486536 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 IGHV1-24A0A0C4DH33 117 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 H7C423 109 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 I3L3M4 83 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 LEPROTL1O95214 131 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 HBDP02042 147 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 ATP5G1P05496 136 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 DEFB130BP0DP73 79 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 DEFB130AP0DP74 79 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 FCER1GP30273 86 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 DAD1P61803 113 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 SBSPONQ8IVN8 264 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 FAM19A2Q8N3H0 131 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 SLC25A29Q8N8R3 303 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 OR10D4PQ8NGN7 298 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 PRADC1Q9BSG0 188 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 HSPB8Q9UJY1 196 aa4.15□□□□□ -1.75
USP41-204ENST00000486536 CSDC2Q9Y534 153 aaKnown RBP4.15□□□□□ -1.75
USP41-204ENST00000486536 TRBV7-3A0A075B6L6 115 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 LOC100131303A0A0U1RQF7 123 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 DEFB4AO15263 64 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 PRB2P02812 416 aaPredicted RBP4.14□□□□□ -1.75
USP41-204ENST00000486536 AKR1D1P51857 326 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 ZC2HC1BQ5TFG8 222 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 DAZ4Q86SG3 579 aaKnown RBP4.14□□□□□ -1.75
USP41-204ENST00000486536 DAZ3Q9NR90 486 aaKnown RBP4.14□□□□□ -1.75
USP41-204ENST00000486536 PRO0255Q9UI72 69 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 HHLA3Q9XRX5 114 aa4.14□□□□□ -1.75
USP41-204ENST00000486536 TRAV9-2A0A087WT02 112 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 A0A096LNJ9 63 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 SMIM6P0DI80 62 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 P0DMU3 169 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 FAM231AP0DMU4 169 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 FAM231CP0DMU5 169 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
USP41-204ENST00000486536 CRYBA4P53673 196 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 UBE2D3P61077 147 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 UBE2D2P62837 147 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 COTL1Q14019 142 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 JOSD1Q15040 202 aaPredicted RBP4.13□□□□□ -1.75
USP41-204ENST00000486536 TMEM97Q5BJF2 176 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 MRAPQ8TCY5 172 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 B9D2Q9BPU9 175 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 RETNQ9HD89 108 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 VWFP04275 2813 aa4.13□□□□□ -1.75
USP41-204ENST00000486536 AGRNO00468 2067 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 A0A0J9YWU9 116 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 LINC00694P0DN24 101 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 PMCHL1Q16048 86 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 C2orf66Q6UXQ4 117 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 SH2D6Q7Z4S9 175 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 SPATA12Q7Z6I5 190 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 Q8N377 158 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
USP41-204ENST00000486536 F5H768 121 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 H3BNG1 76 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.11□□□□□ -1.75
USP41-204ENST00000486536 SYS1-DBNDD2H3BUS1 97 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 KRTDAPP60985 99 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 SMAGPQ0VAQ4 97 aa4.11□□□□□ -1.75
USP41-204ENST00000486536 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms