RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 MRPL52Q86TS9 123 aaKnown RBP7.67□□□□□ -1.18
NUP50-216ENST00000486184 C18orf32Q8TCD1 76 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 CYSLTR1Q9Y271 337 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 COX11Q9Y6N1 276 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 RYR2Q92736 4967 aa7.67□□□□□ -1.18
NUP50-216ENST00000486184 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 IGKV2D-24A0A075B6R9 120 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 IGKV3OR2-268A0A0C4DH90 116 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
NUP50-216ENST00000486184 MIAQ16674 131 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 C1orf43Q9BWL3 253 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
NUP50-216ENST00000486184 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
NUP50-216ENST00000486184 TIMM21Q9BVV7 248 aa7.65□□□□□ -1.18
NUP50-216ENST00000486184 AP5S1Q9NUS5 200 aa7.65□□□□□ -1.18
NUP50-216ENST00000486184 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.18
NUP50-216ENST00000486184 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 DNAH6Q9C0G6 4158 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 RTL8CO15255 209 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 ENHOQ6UWT2 76 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 ZNF664Q8N3J9 261 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 PRR34Q9NV39 138 aa7.64□□□□□ -1.19
NUP50-216ENST00000486184 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
NUP50-216ENST00000486184 LINC00614P0C842 121 aa7.63□□□□□ -1.19
NUP50-216ENST00000486184 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
NUP50-216ENST00000486184 CDC42SE2Q9NRR3 84 aa7.63□□□□□ -1.19
NUP50-216ENST00000486184 IGLV10-54A0A075B6I4 117 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 LINC01546A6NGU7 62 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 SS18Q15532 418 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 Q6ZN92 141 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 Q6ZUT4 128 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
NUP50-216ENST00000486184 KMT2AQ03164 3969 aa7.61□□□□□ -1.19
NUP50-216ENST00000486184 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
NUP50-216ENST00000486184 RNASE13Q5GAN3 156 aaKnown RBP7.61□□□□□ -1.19
NUP50-216ENST00000486184 PAPPA-AS1Q5QFB9 102 aa7.61□□□□□ -1.19
NUP50-216ENST00000486184 Q6ZRN7 208 aaPredicted RBP7.61□□□□□ -1.19
NUP50-216ENST00000486184 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
NUP50-216ENST00000486184 CHCHD1Q96BP2 118 aaKnown RBP7.61□□□□□ -1.19
NUP50-216ENST00000486184 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
NUP50-216ENST00000486184 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
NUP50-216ENST00000486184 HBDP02042 147 aa7.6□□□□□ -1.19
NUP50-216ENST00000486184 NPSP0C0P6 89 aa7.6□□□□□ -1.19
NUP50-216ENST00000486184 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
NUP50-216ENST00000486184 C2orf88Q9BSF0 95 aa7.6□□□□□ -1.19
NUP50-216ENST00000486184 RYR3Q15413 4870 aa7.6□□□□□ -1.19
NUP50-216ENST00000486184 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 TRAV13-1A0A0B4J241 112 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 IFITM10A6NMD0 228 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 C1orf196B1AJZ1 125 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 CCL25O15444 150 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 HSBP1O75506 76 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 ERASQ7Z444 233 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
NUP50-216ENST00000486184 TIMM17AQ99595 171 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
NUP50-216ENST00000486184 VCX2Q9H322 139 aa7.59□□□□□ -1.19
NUP50-216ENST00000486184 GAGE12HA6NDE8 117 aa7.58□□□□□ -1.2
NUP50-216ENST00000486184 XCL1P47992 114 aa7.58□□□□□ -1.2
NUP50-216ENST00000486184 PMCHL1Q16048 86 aa7.58□□□□□ -1.2
NUP50-216ENST00000486184 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
NUP50-216ENST00000486184 IGIPA6NJ69 53 aa7.57□□□□□ -1.2
NUP50-216ENST00000486184 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
NUP50-216ENST00000486184 BAALCQ8WXS3 180 aa7.57□□□□□ -1.2
NUP50-216ENST00000486184 A0A087WTM6 91 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 LECT2O14960 151 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 SERF1AO75920 110 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
NUP50-216ENST00000486184 ATP5LO75964 103 aa7.55□□□□□ -1.2
NUP50-216ENST00000486184 NDUFA6P56556 154 aa7.55□□□□□ -1.2
NUP50-216ENST00000486184 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
NUP50-216ENST00000486184 CD164L2Q6UWJ8 174 aa7.55□□□□□ -1.2
NUP50-216ENST00000486184 A0A096LNJ9 63 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 MALP21145 153 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 SEC11AP67812 179 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 FAM19A2Q8N3H0 131 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 AMELXQ99217 191 aa7.54□□□□□ -1.2
NUP50-216ENST00000486184 COX7A2LO14548 114 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 FOXI1Q12951 378 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 PMVKQ15126 192 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms