RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SS18Q15532 418 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 CLPSL2Q6UWE3 100 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 SCXQ7RTU7 201 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 KIR2DL4Q99706 377 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 TMEM191AQ9H0A3 160 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 TRBV6-5A0A0K0K1A5 114 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 HIGD1CA8MV81 97 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 OXTP01178 125 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 PRSS1P07477 247 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 FCER1GP30273 86 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
CPNE1-226ENST00000486021 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 GATD1Q8NB37 220 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 C20orf203Q8NBC4 194 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 OR5A1Q8NGJ0 315 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 CIRBP-AS1Q8TBR5 109 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 ISOC2Q96AB3 205 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 DNAH11Q96DT5 4516 aa4.87□□□□□ -1.63
CPNE1-226ENST00000486021 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
CPNE1-226ENST00000486021 K7EN84 100 aa4.86□□□□□ -1.63
CPNE1-226ENST00000486021 VCYO14598 125 aa4.86□□□□□ -1.63
CPNE1-226ENST00000486021 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
CPNE1-226ENST00000486021 PYY3Q5JQD4 70 aa4.86□□□□□ -1.63
CPNE1-226ENST00000486021 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
CPNE1-226ENST00000486021 LINC01551Q86U37 167 aa4.86□□□□□ -1.63
CPNE1-226ENST00000486021 PACRGQ96M98 296 aaPredicted RBP4.86□□□□□ -1.63
CPNE1-226ENST00000486021 IGLV4-60A0A075B6I1 120 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 APOMO95445 188 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 FGF6P10767 208 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 HAMPP81172 84 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 JOSD1Q15040 202 aaPredicted RBP4.85□□□□□ -1.63
CPNE1-226ENST00000486021 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 CTDSP1Q9GZU7 261 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 NAT8Q9UHE5 227 aa4.85□□□□□ -1.63
CPNE1-226ENST00000486021 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
CPNE1-226ENST00000486021 TRAV26-2A0A0B4J265 109 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 IGHV1-58A0A0C4DH39 117 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 TRBV27A0A0K0K1C4 114 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 PHOX2AO14813 284 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 DLEU1O43261 78 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 MALP21145 153 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 LINC01620Q4KN68 170 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 PET117Q6UWS5 81 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 CHCHD10Q8WYQ3 142 aaPredicted RBP4.84□□□□□ -1.63
CPNE1-226ENST00000486021 TMEM242Q9NWH2 141 aa4.84□□□□□ -1.63
CPNE1-226ENST00000486021 CSDC2Q9Y534 153 aaKnown RBP4.84□□□□□ -1.63
CPNE1-226ENST00000486021 PPBPP02775 128 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 SRP19P09132 144 aaKnown RBP4.83□□□□□ -1.64
CPNE1-226ENST00000486021 FABP4P15090 132 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 ADIRFQ15847 76 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 ZNF664Q8N3J9 261 aa4.83□□□□□ -1.64
CPNE1-226ENST00000486021 RPL39LQ96EH5 51 aaKnown RBP4.83□□□□□ -1.64
CPNE1-226ENST00000486021 HSPG2P98160 4391 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.82□□□□□ -1.64
CPNE1-226ENST00000486021 LINC00959A0A1B0GUT2 108 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 IGKV2-29A2NJV5 120 aaPredicted RBP4.82□□□□□ -1.64
CPNE1-226ENST00000486021 HSBP1L1C9JCN9 74 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 G0S2P27469 103 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 CKS2P33552 79 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 POLR2KP53803 58 aaKnown RBP4.82□□□□□ -1.64
CPNE1-226ENST00000486021 SUMO2P61956 95 aaKnown RBP4.82□□□□□ -1.64
CPNE1-226ENST00000486021 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 KRTAP26-1Q6PEX3 210 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 Q6ZRU5 148 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 NUP35Q8NFH5 326 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 C20orf78Q9BR46 151 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 PRO1933Q9H354 126 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
CPNE1-226ENST00000486021 GVQW2A0A096LPI5 108 aaPredicted RBP4.81□□□□□ -1.64
CPNE1-226ENST00000486021 C20orf202A1L168 122 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 F8WDY8 70 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 ESDP10768 282 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 XCL1P47992 114 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
CPNE1-226ENST00000486021 CIRBPQ14011 172 aaKnown RBP4.81□□□□□ -1.64
CPNE1-226ENST00000486021 AMN1Q8IY45 258 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 TIMM21Q9BVV7 248 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 CDC42SE2Q9NRR3 84 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
CPNE1-226ENST00000486021 V9GYV3 84 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 RYR1P21817 5038 aa4.81□□□□□ -1.64
CPNE1-226ENST00000486021 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 SMIM27A0A1W2PRY6 76 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 COX7A2LO14548 114 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms