RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 VMO1Q7Z5L0 202 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 NFE4Q86UQ8 179 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 AMN1Q8IY45 258 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 SLC25A29Q8N8R3 303 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 C10orf105Q8TEF2 133 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 DSCR8Q96T75 97 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 NXT2Q9NPJ8 142 aaKnown RBP2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 LINC00588Q9Y4M8 146 aa2.86□□□□□ -1.95
PRPF38B-205ENST00000485810 SPENQ96T58 3664 aaKnown RBP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 TPRP12270 2363 aaKnown RBP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 RIF1Q5UIP0 2472 aaKnown RBP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 FRYLO94915 3013 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 TRBV7-7A0A0K0K1E9 115 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 CLPSL1A2RUU4 121 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 RPL37AP8A6NKH3 93 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 KRTAP16-1A8MUX0 517 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 LYNX1G3V0Z9 82 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 NPYP01303 97 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 IGKCP01834 107 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 APELAP0DMC3 54 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 LYNX1P0DP58 116 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 CKS2P33552 79 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 FUSP35637 526 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 RPL36AP83881 106 aaKnown RBP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 CIRBPQ14011 172 aaKnown RBP2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 C2orf66Q6UXQ4 117 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 SBSPONQ8IVN8 264 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 Q8N8P6 123 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 Q8N9W7 124 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 LINC01560Q8TB33 94 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 DIRC1Q969H9 104 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 XAGE1AQ9HD64 81 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 HHLA3Q9XRX5 114 aa2.85□□□□□ -1.95
PRPF38B-205ENST00000485810 TLN1Q9Y490 2541 aaKnown RBP2.84□□□□□ -1.95
PRPF38B-205ENST00000485810 ANKRD11Q6UB99 2663 aaPredicted RBP2.84□□□□□ -1.95
PRPF38B-205ENST00000485810 FREM2Q5SZK8 3169 aa2.84□□□□□ -1.95
PRPF38B-205ENST00000485810 IGLV4-3A0A075B6K6 122 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 IGKV2-40A0A087WW87 121 aaPredicted RBP2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 TRBV7-1A0A0A6YYK4 115 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 TRAV12-1A0A0B4J245 112 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 IGKV3D-20A0A0C4DH25 116 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 IGHV7-4-1A0A0J9YVY3 117 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 LINC01549A6NIU2 74 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 TIMM17BO60830 172 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 GAS8-AS1O95177 125 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 TCL1BO95988 128 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 IGKV2D-40P01614 121 aaPredicted RBP2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 SLC25A16P16260 332 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 BLCAPP62952 87 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 CASC10Q5T4H9 136 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 Q6ZRP5 223 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 DYNAPQ8N1N2 210 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 FAM104AQ969W3 186 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 CAMK2N2Q96S95 79 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 DPH3P1Q9H4G8 78 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 PTPRQQ9UMZ3 2332 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 BSNQ9UPA5 3926 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 HILPDAQ9Y5L2 63 aa2.84□□□□□ -1.96
PRPF38B-205ENST00000485810 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 ZNF292O60281 2723 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 ABCA4P78363 2273 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 WNK2Q9Y3S1 2297 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 ZFHX4Q86UP3 3567 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 PRRC2CQ9Y520 2896 aaKnown RBP2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 FAM223BA6NKX1 122 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 SMIM1B2RUZ4 78 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 PRAC2D3DTV9 90 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 H3BUA1 57 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 H3BUT2 72 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 LEPROTO15243 131 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 PPP1R17O96001 155 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 IGHV3-11P01762 117 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 CD28P10747 220 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 EGFEM1PQ0D2K5 195 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 C15orf32Q32M92 178 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 ETDBQ3ZM63 59 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 C9orf66Q5T8R8 295 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 CEMP1Q6PRD7 247 aaPredicted RBP2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 FAM223AQ8IWN6 122 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 C3orf56Q8N813 242 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 MYOZ3Q8TDC0 251 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 ITLN2Q8WWU7 325 aaPredicted RBP2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 SCGB3A1Q96QR1 104 aa2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 PTPRZ1P23471 2315 aaPredicted RBP2.83□□□□□ -1.96
PRPF38B-205ENST00000485810 SPTA1P02549 2419 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 TMSB15BA0A087X1C1 80 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 IGHV3-16A0A0C4DH30 117 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 SOCS3O14543 225 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 IGKV3-20P01619 116 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 SMIM13P0DJ93 91 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 EFNA4P52798 201 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms