RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
PTCD1-205ENST00000485746 TRBV24-1A0A075B6N3 115 aa8.17□□□□□ -1.1
PTCD1-205ENST00000485746 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
PTCD1-205ENST00000485746 PRELID3AQ96N28 172 aa8.17□□□□□ -1.1
PTCD1-205ENST00000485746 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
PTCD1-205ENST00000485746 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 PHOX2AO14813 284 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 NPYP01303 97 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 RAB5AP20339 215 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 XCL1P47992 114 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
PTCD1-205ENST00000485746 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
PTCD1-205ENST00000485746 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 SEC11CQ9BY50 192 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 CTDSP1Q9GZU7 261 aa8.16□□□□□ -1.1
PTCD1-205ENST00000485746 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
PTCD1-205ENST00000485746 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
PTCD1-205ENST00000485746 S100PP25815 95 aa8.15□□□□□ -1.1
PTCD1-205ENST00000485746 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
PTCD1-205ENST00000485746 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
PTCD1-205ENST00000485746 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
PTCD1-205ENST00000485746 CCL25O15444 150 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 Q5VSD8 79 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 MAP1LC3AQ9H492 121 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 RYR1P21817 5038 aa8.14□□□□□ -1.11
PTCD1-205ENST00000485746 HSPG2P98160 4391 aa8.13□□□□□ -1.11
PTCD1-205ENST00000485746 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
PTCD1-205ENST00000485746 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
PTCD1-205ENST00000485746 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
PTCD1-205ENST00000485746 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
PTCD1-205ENST00000485746 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
PTCD1-205ENST00000485746 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
PTCD1-205ENST00000485746 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
PTCD1-205ENST00000485746 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
PTCD1-205ENST00000485746 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
PTCD1-205ENST00000485746 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
PTCD1-205ENST00000485746 C1orf196B1AJZ1 125 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
PTCD1-205ENST00000485746 FOXI1Q12951 378 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 CD164L2Q6UWJ8 174 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 Q6ZSA8 131 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 RPS10P5Q9NQ39 176 aa8.11□□□□□ -1.11
PTCD1-205ENST00000485746 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 MALP21145 153 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
PTCD1-205ENST00000485746 Q6ZUT4 128 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 SPANXA1Q9NS26 97 aa8.1□□□□□ -1.11
PTCD1-205ENST00000485746 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
PTCD1-205ENST00000485746 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
PTCD1-205ENST00000485746 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
PTCD1-205ENST00000485746 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
PTCD1-205ENST00000485746 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
PTCD1-205ENST00000485746 ZNF561-AS1K7EIQ3 104 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 COX7A2LO14548 114 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
PTCD1-205ENST00000485746 RHEBQ15382 184 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 NDUFA5Q16718 116 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 Q8N8P6 123 aa8.08□□□□□ -1.12
PTCD1-205ENST00000485746 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
PTCD1-205ENST00000485746 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
PTCD1-205ENST00000485746 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
PTCD1-205ENST00000485746 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
PTCD1-205ENST00000485746 NXT2Q9NPJ8 142 aaKnown RBP8.07□□□□□ -1.12
PTCD1-205ENST00000485746 CARHSP1Q9Y2V2 147 aaKnown RBP8.07□□□□□ -1.12
PTCD1-205ENST00000485746 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
PTCD1-205ENST00000485746 APOMO95445 188 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 SLPIP03973 132 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
PTCD1-205ENST00000485746 ORMDL2Q53FV1 153 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
PTCD1-205ENST00000485746 APOC3P02656 99 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 G0S2P27469 103 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 COX19Q49B96 90 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 Q6ZN92 141 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
PTCD1-205ENST00000485746 FABP9Q0Z7S8 132 aa8.04□□□□□ -1.12
PTCD1-205ENST00000485746 TMEM141Q96I45 108 aa8.04□□□□□ -1.12
PTCD1-205ENST00000485746 CARD19Q96LW7 228 aa8.04□□□□□ -1.12
PTCD1-205ENST00000485746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
PTCD1-205ENST00000485746 K7EMI3 77 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 SNAPINO95295 136 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 COX6A2Q02221 97 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 TEX43Q6ZNM6 134 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 C2orf88Q9BSF0 95 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 PKIGQ9Y2B9 76 aa8.03□□□□□ -1.12
PTCD1-205ENST00000485746 PYGO1Q9Y3Y4 419 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms