RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
CTSA-208ENST00000485627 SPATA45Q537H7 98 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 AMMECR1LQ6DCA0 310 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
CTSA-208ENST00000485627 ICOSQ9Y6W8 199 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
CTSA-208ENST00000485627 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 PRSS29PA6NIE9 313 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 F8VRH5 84 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 H7C423 109 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
CTSA-208ENST00000485627 PLNP26678 52 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 PKIAP61925 76 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 NTM-AS1Q6ZSK4 140 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 Q6ZTC4 211 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 ZNF664Q8N3J9 261 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
CTSA-208ENST00000485627 IGLV4-3A0A075B6K6 122 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 A0A096LPF7 62 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 FGF6P10767 208 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 NANOS2P60321 138 aaKnown RBP6.66□□□□□ -1.34
CTSA-208ENST00000485627 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 C2orf88Q9BSF0 95 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 PRO1933Q9H354 126 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 CST9LQ9H4G1 147 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
CTSA-208ENST00000485627 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
CTSA-208ENST00000485627 DEFB131BA0A096LNP1 70 aa6.65□□□□□ -1.34
CTSA-208ENST00000485627 hDV102S1A0JD36 115 aa6.65□□□□□ -1.34
CTSA-208ENST00000485627 GAGE6Q13070 117 aa6.65□□□□□ -1.34
CTSA-208ENST00000485627 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
CTSA-208ENST00000485627 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
CTSA-208ENST00000485627 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.34
CTSA-208ENST00000485627 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.35
CTSA-208ENST00000485627 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 TMEM262E9PQX1 116 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 H3BNG1 76 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
CTSA-208ENST00000485627 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
CTSA-208ENST00000485627 MAJINQ3KP22 176 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 CEMP1Q6PRD7 247 aaPredicted RBP6.64□□□□□ -1.35
CTSA-208ENST00000485627 Q6ZUT4 128 aa6.64□□□□□ -1.35
CTSA-208ENST00000485627 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
CTSA-208ENST00000485627 NHLRC4P0CG21 123 aaPredicted RBP6.63□□□□□ -1.35
CTSA-208ENST00000485627 HERVK_113P61574 105 aa6.63□□□□□ -1.35
CTSA-208ENST00000485627 ZC2HC1BQ5TFG8 222 aa6.63□□□□□ -1.35
CTSA-208ENST00000485627 AMELXQ99217 191 aa6.63□□□□□ -1.35
CTSA-208ENST00000485627 RNASE13Q5GAN3 156 aaKnown RBP6.62□□□□□ -1.35
CTSA-208ENST00000485627 STPG4Q8N801 248 aa6.62□□□□□ -1.35
CTSA-208ENST00000485627 SEC11AP67812 179 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 TMEM170BQ5T4T1 132 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 LELP1Q5T871 98 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 CHAC1Q9BUX1 264 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 CDC42SE2Q9NRR3 84 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
CTSA-208ENST00000485627 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 TRAV8-6A0A0B4J262 113 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 A0A0J9YXV3 536 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 IGLC3P0DOY3 106 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 NMUP48645 174 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 NFE4Q86UQ8 179 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
CTSA-208ENST00000485627 GEMIN7Q9H840 131 aaKnown RBP6.6□□□□□ -1.35
CTSA-208ENST00000485627 TRAV13-1A0A0B4J241 112 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 DDTP30046 118 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 UBE2D1P51668 147 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 TCTAP57738 103 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 TIRAPP58753 221 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 LYPD5Q6UWN5 251 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 WWC2-AS2Q96NR7 200 aa6.59□□□□□ -1.35
CTSA-208ENST00000485627 RYR2Q92736 4967 aa6.59□□□□□ -1.36
CTSA-208ENST00000485627 IGLV4-60A0A075B6I1 120 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 IGKV3OR2-268A0A0C4DH90 116 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 H3BRM9 83 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 COX8AP10176 69 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 RBX1P62877 108 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 HERVK_113P63121 156 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
CTSA-208ENST00000485627 HUWE1Q7Z6Z7 4374 aaKnown RBP6.57□□□□□ -1.36
CTSA-208ENST00000485627 E9PLD3 99 aa6.57□□□□□ -1.36
CTSA-208ENST00000485627 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
CTSA-208ENST00000485627 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
CTSA-208ENST00000485627 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
CTSA-208ENST00000485627 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
CTSA-208ENST00000485627 IGLL5B9A064 214 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms