RNA–Protein interactions for RNA: ENST00000485272.5

RIPPLY3-202, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 2,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-202ENST00000485272 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
RIPPLY3-202ENST00000485272 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
RIPPLY3-202ENST00000485272 SMIM9A6NGZ8 99 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 P0DMU3 169 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 FAM231AP0DMU4 169 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 FAM231CP0DMU5 169 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 BAALCQ8WXS3 180 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 A0A0J9YY99 117 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 C19orf73Q9NVV2 129 aa8.87□□□□□ -0.99
RIPPLY3-202ENST00000485272 M0R2P5 195 aa8.86□□□□□ -0.99
RIPPLY3-202ENST00000485272 KRTAP10-11P60412 298 aa8.86□□□□□ -0.99
RIPPLY3-202ENST00000485272 PAPPA-AS1Q5QFB9 102 aa8.86□□□□□ -0.99
RIPPLY3-202ENST00000485272 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
RIPPLY3-202ENST00000485272 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
RIPPLY3-202ENST00000485272 TRAV26-2A0A0B4J265 109 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 A0A0J9YX75 114 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 C14orf178Q8N769 122 aaPredicted RBP8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 FAM240AA0A1B0GVK7 77 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 A0A1B0GX51 115 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 DNAH3Q8TD57 4116 aa8.85□□□□□ -0.99
RIPPLY3-202ENST00000485272 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
RIPPLY3-202ENST00000485272 TRPT1Q86TN4 253 aaKnown RBP8.84□□□□□ -0.99
RIPPLY3-202ENST00000485272 CHCHD5Q9BSY4 110 aa8.84□□□□□ -0.99
RIPPLY3-202ENST00000485272 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 VCYO14598 125 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 IGHV3-33P01772 117 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 EGFEM1PQ0D2K5 195 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 TRBV6-5A0A0K0K1A5 114 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 H3BMM0 161 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
RIPPLY3-202ENST00000485272 MGPP08493 103 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 DEFB121Q5J5C9 76 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 TMEM141Q96I45 108 aa8.83□□□□□ -1
RIPPLY3-202ENST00000485272 J3KT08 172 aa8.82□□□□□ -1
RIPPLY3-202ENST00000485272 GNRH2O43555 120 aa8.82□□□□□ -1
RIPPLY3-202ENST00000485272 UBE2WQ96B02 151 aa8.82□□□□□ -1
RIPPLY3-202ENST00000485272 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 RBMY1BA6NDE4 496 aaKnown RBP8.81□□□□□ -1
RIPPLY3-202ENST00000485272 RBMY1EA6NEQ0 496 aaKnown RBP8.81□□□□□ -1
RIPPLY3-202ENST00000485272 RBMY1DP0C7P1 496 aaKnown RBP8.81□□□□□ -1
RIPPLY3-202ENST00000485272 ATXN8Q156A1 80 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
RIPPLY3-202ENST00000485272 A0A0B4J2C4 111 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
RIPPLY3-202ENST00000485272 LINC00315P59091 139 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 C9orf85Q96MD7 179 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 SPANXDQ9BXN6 97 aa8.81□□□□□ -1
RIPPLY3-202ENST00000485272 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
RIPPLY3-202ENST00000485272 STHQ8IWL8 128 aa8.8□□□□□ -1
RIPPLY3-202ENST00000485272 TIMM17AQ99595 171 aa8.8□□□□□ -1
RIPPLY3-202ENST00000485272 LOC107984640A0A0U1RRK4 108 aa8.8□□□□□ -1
RIPPLY3-202ENST00000485272 PRB2P02812 416 aaPredicted RBP8.8□□□□□ -1
RIPPLY3-202ENST00000485272 RPS28P62857 69 aaKnown RBP8.8□□□□□ -1
RIPPLY3-202ENST00000485272 FAM19A5Q7Z5A7 132 aaPredicted RBP8.8□□□□□ -1
RIPPLY3-202ENST00000485272 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
RIPPLY3-202ENST00000485272 AMELXQ99217 191 aa8.8□□□□□ -1
RIPPLY3-202ENST00000485272 IMUPQ9GZP8 106 aa8.8□□□□□ -1
RIPPLY3-202ENST00000485272 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 HERVK_113P61574 105 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 SPINK13Q1W4C9 94 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
RIPPLY3-202ENST00000485272 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 A8MTW9 85 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 RPL35AP18077 110 aaKnown RBP8.78□□□□□ -1
RIPPLY3-202ENST00000485272 RHOHQ15669 191 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 TMEM101Q96IK0 257 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 SPANXCQ9NY87 97 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 IGLV4-69A0A075B6H9 119 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 UQCRQO14949 82 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 HERVK_113P63121 156 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 PIK3CD-AS1Q5SR53 167 aa8.78□□□□□ -1
RIPPLY3-202ENST00000485272 TRAV12-3A0A0B4J271 114 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 H3BT86 120 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 PMVKQ15126 192 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 ZNF56Q15929 161 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 SUMO4Q6EEV6 95 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
RIPPLY3-202ENST00000485272 A4D1N5 150 aa8.76□□□□□ -1.01
RIPPLY3-202ENST00000485272 C11orf86A6NJI1 115 aa8.76□□□□□ -1.01
RIPPLY3-202ENST00000485272 TMEM170BQ5T4T1 132 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms