RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 DEFB104AQ8WTQ1 72 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 BTF3L4Q96K17 158 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 FAT1Q14517 4588 aa4.02□□□□□ -1.77
PTCD3-215ENST00000484203 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 A0A1B0GW15 77 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 ZNF727A8MUV8 499 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 HIGD1CA8MV81 97 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 I3L3M4 83 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 TCAPO15273 167 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 APCSP02743 223 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 CEBPGP53567 150 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 CNBPP62633 177 aaKnown RBP4.01□□□□□ -1.77
PTCD3-215ENST00000484203 RIGQ13278 110 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 TMEM241Q24JQ0 296 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 LINC01551Q86U37 167 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 GATD1Q8NB37 220 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 GTSF1Q8WW33 167 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 MRAP2Q96G30 205 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 TMEM101Q96IK0 257 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 TMEM191AQ9H0A3 160 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 OSTCQ9NRP0 149 aa4.01□□□□□ -1.77
PTCD3-215ENST00000484203 FLG2Q5D862 2391 aaPredicted RBP4□□□□□ -1.77
PTCD3-215ENST00000484203 SDHAF1A6NFY7 115 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 CCL25O15444 150 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 S100A8P05109 93 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 PMCHP20382 165 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 PEA15Q15121 130 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 SCXQ7RTU7 201 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 RNF185Q96GF1 192 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 ST20Q9HBF5 79 aa4□□□□□ -1.77
PTCD3-215ENST00000484203 IGHV3-64A0A075B6Q5 118 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 TRBV27A0A0K0K1C4 114 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 hDV102S1A0JD36 115 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 VCYO14598 125 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 PPP1R2P9O14990 202 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 PRSS1P07477 247 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 RNASEKQ6P5S7 137 aaKnown RBP3.99□□□□□ -1.77
PTCD3-215ENST00000484203 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 CLPSL2Q6UWE3 100 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 OR5A1Q8NGJ0 315 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 TMEM18Q96B42 140 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 KIR2DL4Q99706 377 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 NAT8Q9UHE5 227 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 NAT8BQ9UHF3 227 aa3.99□□□□□ -1.77
PTCD3-215ENST00000484203 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 HERC1Q15751 4861 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 TRAV26-2A0A0B4J265 109 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 LINC00862A6NCI5 91 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 F8W036 122 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
PTCD3-215ENST00000484203 FGF6P10767 208 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 FCER1GP30273 86 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 SDIM1Q6ZPB5 146 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 MRPL52Q86TS9 123 aaKnown RBP3.98□□□□□ -1.77
PTCD3-215ENST00000484203 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 DPH3Q96FX2 82 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 LINC00474Q9P2X8 69 aa3.98□□□□□ -1.77
PTCD3-215ENST00000484203 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
PTCD3-215ENST00000484203 C7orf77A4D0Y5 90 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 KRTAP29-1A8MX34 341 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-215ENST00000484203 OXTP01178 125 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 PPBPP02775 128 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 RAB4AP20338 218 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 RPS10P46783 165 aaKnown RBP3.97□□□□□ -1.77
PTCD3-215ENST00000484203 POLR2KP53803 58 aaKnown RBP3.97□□□□□ -1.77
PTCD3-215ENST00000484203 SS18Q15532 418 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 CHCHD10Q8WYQ3 142 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-215ENST00000484203 ISOC2Q96AB3 205 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 RPL39LQ96EH5 51 aaKnown RBP3.97□□□□□ -1.77
PTCD3-215ENST00000484203 C20orf78Q9BR46 151 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 CTDSP1Q9GZU7 261 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 V9GYV3 84 aa3.97□□□□□ -1.77
PTCD3-215ENST00000484203 GVQW2A0A096LPI5 108 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-215ENST00000484203 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 SMIM27A0A1W2PRY6 76 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 C1orf196B1AJZ1 125 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 PHOX2AO14813 284 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 ESDP10768 282 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 RAB14P61106 215 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 RPL37AP61513 92 aaKnown RBP3.96□□□□□ -1.78
PTCD3-215ENST00000484203 RPL23P62829 140 aaKnown RBP3.96□□□□□ -1.78
PTCD3-215ENST00000484203 RPL32P62910 135 aaKnown RBP3.96□□□□□ -1.78
PTCD3-215ENST00000484203 HAMPP81172 84 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 CIRBPQ14011 172 aaKnown RBP3.96□□□□□ -1.78
PTCD3-215ENST00000484203 ADIRFQ15847 76 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 CD164L2Q6UWJ8 174 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 NUP35Q8NFH5 326 aa3.96□□□□□ -1.78
PTCD3-215ENST00000484203 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 TRBV24-1A0A075B6N3 115 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-215ENST00000484203 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 IGKV2-29A2NJV5 120 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-215ENST00000484203 TSHBP01222 138 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 495.7 ms