RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
NDUFA3-213ENST00000484103 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
NDUFA3-213ENST00000484103 AP5S1Q9NUS5 200 aa12.33□□□□□ -0.44
NDUFA3-213ENST00000484103 CHTF8P0CG12 524 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 S100PP25815 95 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 HBBP68871 147 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 HIGD2BQ4VC39 106 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 SDIM1Q6ZPB5 146 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 TMEM191AQ9H0A3 160 aa12.32□□□□□ -0.44
NDUFA3-213ENST00000484103 S100A1P23297 94 aa12.31□□□□□ -0.44
NDUFA3-213ENST00000484103 HNRNPA3P51991 378 aaKnown RBP12.31□□□□□ -0.44
NDUFA3-213ENST00000484103 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
NDUFA3-213ENST00000484103 APCSP02743 223 aa12.3□□□□□ -0.44
NDUFA3-213ENST00000484103 SLPIP03973 132 aa12.3□□□□□ -0.44
NDUFA3-213ENST00000484103 S100A8P05109 93 aa12.3□□□□□ -0.44
NDUFA3-213ENST00000484103 PKHD1L1Q86WI1 4243 aa12.3□□□□□ -0.44
NDUFA3-213ENST00000484103 IGHV3-64A0A075B6Q5 118 aa12.29□□□□□ -0.44
NDUFA3-213ENST00000484103 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
NDUFA3-213ENST00000484103 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
NDUFA3-213ENST00000484103 CAMPP49913 170 aa12.29□□□□□ -0.44
NDUFA3-213ENST00000484103 FAT3Q8TDW7 4589 aa12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 PMCHP20382 165 aa12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 CNBPP62633 177 aaKnown RBP12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 RNF185Q96GF1 192 aa12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
NDUFA3-213ENST00000484103 TRBV24-1A0A075B6N3 115 aa12.27□□□□□ -0.45
NDUFA3-213ENST00000484103 FGF6P10767 208 aa12.27□□□□□ -0.45
NDUFA3-213ENST00000484103 C15orf56Q8N910 161 aa12.27□□□□□ -0.45
NDUFA3-213ENST00000484103 CHCHD10Q8WYQ3 142 aaPredicted RBP12.27□□□□□ -0.45
NDUFA3-213ENST00000484103 TGIF2-C20orf24A0A0A6YYL0 155 aa12.25□□□□□ -0.45
NDUFA3-213ENST00000484103 RAB4AP20338 218 aa12.25□□□□□ -0.45
NDUFA3-213ENST00000484103 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
NDUFA3-213ENST00000484103 AMN1Q8IY45 258 aa12.25□□□□□ -0.45
NDUFA3-213ENST00000484103 NCR2O95944 276 aa12.24□□□□□ -0.45
NDUFA3-213ENST00000484103 XCL1P47992 114 aa12.24□□□□□ -0.45
NDUFA3-213ENST00000484103 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
NDUFA3-213ENST00000484103 A0A087WYN8 130 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 I3L3M4 83 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 COX6A2Q02221 97 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 COX19Q49B96 90 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 ST20Q9HBF5 79 aa12.23□□□□□ -0.45
NDUFA3-213ENST00000484103 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 SCO1O75880 301 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 OXTP01178 125 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
NDUFA3-213ENST00000484103 TSHBP01222 138 aa12.21□□□□□ -0.45
NDUFA3-213ENST00000484103 RPS10P46783 165 aaKnown RBP12.21□□□□□ -0.45
NDUFA3-213ENST00000484103 SPACA4Q8TDM5 124 aa12.21□□□□□ -0.45
NDUFA3-213ENST00000484103 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
NDUFA3-213ENST00000484103 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
NDUFA3-213ENST00000484103 OR5A1Q8NGJ0 315 aa12.2□□□□□ -0.46
NDUFA3-213ENST00000484103 PRSS3P2Q8NHM4 247 aa12.2□□□□□ -0.46
NDUFA3-213ENST00000484103 CCL25O15444 150 aa12.19□□□□□ -0.46
NDUFA3-213ENST00000484103 MT-ND6P03923 174 aa12.19□□□□□ -0.46
NDUFA3-213ENST00000484103 FOXI1Q12951 378 aa12.19□□□□□ -0.46
NDUFA3-213ENST00000484103 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
NDUFA3-213ENST00000484103 TRBV6-5A0A0K0K1A5 114 aa12.18□□□□□ -0.46
NDUFA3-213ENST00000484103 H7C423 109 aa12.18□□□□□ -0.46
NDUFA3-213ENST00000484103 COLCA2A8K830 154 aa12.17□□□□□ -0.46
NDUFA3-213ENST00000484103 PHOX2AO14813 284 aa12.17□□□□□ -0.46
NDUFA3-213ENST00000484103 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
NDUFA3-213ENST00000484103 NRACQ8N912 160 aa12.17□□□□□ -0.46
NDUFA3-213ENST00000484103 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 D6R8Y8 96 aa12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 PPBPP02775 128 aa12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
NDUFA3-213ENST00000484103 GVQW2A0A096LPI5 108 aaPredicted RBP12.15□□□□□ -0.46
NDUFA3-213ENST00000484103 ESDP10768 282 aa12.15□□□□□ -0.46
NDUFA3-213ENST00000484103 FCER1GP30273 86 aa12.15□□□□□ -0.46
NDUFA3-213ENST00000484103 CKS2P33552 79 aa12.15□□□□□ -0.46
NDUFA3-213ENST00000484103 ORMDL3Q8N138 153 aa12.15□□□□□ -0.46
NDUFA3-213ENST00000484103 PPP1R17O96001 155 aa12.14□□□□□ -0.47
NDUFA3-213ENST00000484103 STPG4Q8N801 248 aa12.14□□□□□ -0.47
NDUFA3-213ENST00000484103 C7orf33Q8WU49 177 aa12.14□□□□□ -0.47
NDUFA3-213ENST00000484103 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
NDUFA3-213ENST00000484103 A0A096LNI7 61 aa12.13□□□□□ -0.47
NDUFA3-213ENST00000484103 SS18Q15532 418 aa12.13□□□□□ -0.47
NDUFA3-213ENST00000484103 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
NDUFA3-213ENST00000484103 NPYP01303 97 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 PLA2G2DQ9UNK4 145 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
NDUFA3-213ENST00000484103 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
NDUFA3-213ENST00000484103 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
NDUFA3-213ENST00000484103 RAB5AP20339 215 aa12.11□□□□□ -0.47
NDUFA3-213ENST00000484103 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
NDUFA3-213ENST00000484103 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
NDUFA3-213ENST00000484103 PRELID3AQ96N28 172 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms