RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 C11orf45Q8TAV5 145 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 LINC01587Q99440 93 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 C1QTNF4Q9BXJ3 329 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 MUC4Q99102 2169 aa5.56□□□□□ -1.52
SNX13-208ENST00000482558 POLQO75417 2590 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 RPL18AQ02543 176 aaKnown RBP5.55□□□□□ -1.52
SNX13-208ENST00000482558 C18orf65Q6ZTR6 163 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 NFE4Q86UQ8 179 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 CEND1Q8N111 149 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 OR5A1Q8NGJ0 315 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
SNX13-208ENST00000482558 JPT2Q9H910 190 aa5.55□□□□□ -1.52
SNX13-208ENST00000482558 ABCA12Q86UK0 2595 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 TRAV8-6A0A0B4J262 113 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 RBMY1CP0DJD4 496 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 UFSP1Q6NVU6 142 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 MORN3Q6PF18 240 aaPredicted RBP5.54□□□□□ -1.52
SNX13-208ENST00000482558 LINC01006Q8NI28 216 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 DOPEY2Q9Y3R5 2298 aa5.54□□□□□ -1.52
SNX13-208ENST00000482558 RBMY1BA6NDE4 496 aaKnown RBP5.53□□□□□ -1.52
SNX13-208ENST00000482558 RBMY1EA6NEQ0 496 aaKnown RBP5.53□□□□□ -1.52
SNX13-208ENST00000482558 K7EP13 123 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 CCL25O15444 150 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 RBMY1DP0C7P1 496 aaKnown RBP5.53□□□□□ -1.52
SNX13-208ENST00000482558 CD28P10747 220 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 FABP2P12104 132 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 C11orf72Q8NBR9 251 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 PRADC1Q9BSG0 188 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 MYO9AB2RTY4 2548 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 VPS13CQ709C8 3753 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 FBN2P35556 2912 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 CENPEQ02224 2701 aa5.53□□□□□ -1.52
SNX13-208ENST00000482558 CELSR2Q9HCU4 2923 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 TINCRA0A1B0GVN0 87 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 K7EQD1 137 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 IGLV1-51P01701 117 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 RBMY1A1P0DJD3 496 aaKnown RBP5.52□□□□□ -1.53
SNX13-208ENST00000482558 RBMY1FQ15415 496 aaKnown RBP5.52□□□□□ -1.53
SNX13-208ENST00000482558 AMMECR1LQ6DCA0 310 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 NDUFA11Q86Y39 141 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 TMEM263Q8WUH6 116 aaKnown RBP5.52□□□□□ -1.53
SNX13-208ENST00000482558 PLEKHB2Q96CS7 222 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 TP73-AS1Q9UF72 201 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 SVEP1Q4LDE5 3571 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 APCP25054 2843 aa5.52□□□□□ -1.53
SNX13-208ENST00000482558 TEX15Q9BXT5 2789 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 CRYBG3Q68DQ2 2970 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 MAP1AP78559 2803 aaPredicted RBP5.51□□□□□ -1.53
SNX13-208ENST00000482558 A0A1W2PPM0 123 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 ZNF815PA8K554 130 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 K7EP34 96 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 LEPROTO15243 131 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 HTN1P15515 57 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 INSL3P51460 131 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
SNX13-208ENST00000482558 DAZ2Q13117 558 aaKnown RBP5.51□□□□□ -1.53
SNX13-208ENST00000482558 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 AMELXQ99217 191 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 CSMD1Q96PZ7 3565 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 ITPR3Q14573 2671 aa5.51□□□□□ -1.53
SNX13-208ENST00000482558 MXRA5Q9NR99 2828 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 TRBV7-3A0A075B6L6 115 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 IGHV3OR16-12A0A075B7B8 117 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 TRAV4A0A0B4J268 109 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 H3BUT2 72 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 P0DMU3 169 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 FAM231AP0DMU4 169 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 FAM231CP0DMU5 169 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 LGALS3P17931 250 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 RPL39P62891 51 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 MRPS36P82909 103 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 RPL36AP83881 106 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 NEGR1Q7Z3B1 354 aa5.5□□□□□ -1.53
SNX13-208ENST00000482558 DAZ4Q86SG3 579 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 DAZ3Q9NR90 486 aaKnown RBP5.5□□□□□ -1.53
SNX13-208ENST00000482558 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 H7C423 109 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 J3QQQ9 107 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 AZU1P20160 251 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 FXYD2P54710 66 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 TCTAP57738 103 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 Q6ZVH6 145 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
SNX13-208ENST00000482558 XCL2Q9UBD3 114 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 HELZ2Q9BYK8 2649 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms