RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
RXRB-203ENST00000481441 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 RAB5AP20339 215 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 PKIAP61925 76 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 LINC00269Q8N2A0 174 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
RXRB-203ENST00000481441 A0A0J9YXV3 536 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 SLPIP03973 132 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 RBX1P62877 108 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 COX19Q49B96 90 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 NEXN-AS1Q8NBZ9 246 aa10.92□□□□□ -0.66
RXRB-203ENST00000481441 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
RXRB-203ENST00000481441 NTM-AS1Q6ZSK4 140 aa10.91□□□□□ -0.66
RXRB-203ENST00000481441 AMN1Q8IY45 258 aa10.91□□□□□ -0.66
RXRB-203ENST00000481441 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
RXRB-203ENST00000481441 SMIM17P0DL12 118 aa10.9□□□□□ -0.66
RXRB-203ENST00000481441 FAM104BQ5XKR9 115 aa10.9□□□□□ -0.66
RXRB-203ENST00000481441 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
RXRB-203ENST00000481441 MT-ND6P03923 174 aa10.89□□□□□ -0.67
RXRB-203ENST00000481441 MGPP08493 103 aa10.89□□□□□ -0.67
RXRB-203ENST00000481441 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
RXRB-203ENST00000481441 MRPL18Q9H0U6 180 aaKnown RBP10.89□□□□□ -0.67
RXRB-203ENST00000481441 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
RXRB-203ENST00000481441 IGLV10-54A0A075B6I4 117 aa10.88□□□□□ -0.67
RXRB-203ENST00000481441 APCSP02743 223 aa10.88□□□□□ -0.67
RXRB-203ENST00000481441 RAB4AP20338 218 aa10.88□□□□□ -0.67
RXRB-203ENST00000481441 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
RXRB-203ENST00000481441 GAGE6Q13070 117 aa10.88□□□□□ -0.67
RXRB-203ENST00000481441 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
RXRB-203ENST00000481441 REG3AQ06141 175 aa10.87□□□□□ -0.67
RXRB-203ENST00000481441 ZNF56Q15929 161 aa10.87□□□□□ -0.67
RXRB-203ENST00000481441 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
RXRB-203ENST00000481441 TRGC2P03986 189 aa10.86□□□□□ -0.67
RXRB-203ENST00000481441 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
RXRB-203ENST00000481441 TMEM97Q5BJF2 176 aa10.86□□□□□ -0.67
RXRB-203ENST00000481441 TRAV26-2A0A0B4J265 109 aa10.85□□□□□ -0.67
RXRB-203ENST00000481441 F5H697 171 aa10.85□□□□□ -0.67
RXRB-203ENST00000481441 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 NCR2O95944 276 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 TRAV8-4A0A0B4J246 113 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
RXRB-203ENST00000481441 D6R8Y8 96 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 CKS2P33552 79 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 COX6A2Q02221 97 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 IQCJQ1A5X6 159 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 REG3GQ6UW15 175 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 C20orf203Q8NBC4 194 aa10.83□□□□□ -0.68
RXRB-203ENST00000481441 M0QY20 66 aa10.82□□□□□ -0.68
RXRB-203ENST00000481441 MAJINQ3KP22 176 aa10.82□□□□□ -0.68
RXRB-203ENST00000481441 ORMDL3Q8N138 153 aa10.82□□□□□ -0.68
RXRB-203ENST00000481441 LPAP08519 4548 aa10.81□□□□□ -0.68
RXRB-203ENST00000481441 PPBPP02775 128 aa10.81□□□□□ -0.68
RXRB-203ENST00000481441 PRSS3P2Q8NHM4 247 aa10.81□□□□□ -0.68
RXRB-203ENST00000481441 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
RXRB-203ENST00000481441 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
RXRB-203ENST00000481441 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
RXRB-203ENST00000481441 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.681e-7■□□□□ 10.6
RXRB-203ENST00000481441 STPG4Q8N801 248 aa10.8□□□□□ -0.68
RXRB-203ENST00000481441 NRACQ8N912 160 aa10.8□□□□□ -0.68
RXRB-203ENST00000481441 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
RXRB-203ENST00000481441 IGLV4-60A0A075B6I1 120 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 IGKV2-24A0A0C4DH68 120 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 C1orf196B1AJZ1 125 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 H7C1H1 209 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 NPYP01303 97 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 C15orf56Q8N910 161 aa10.79□□□□□ -0.68
RXRB-203ENST00000481441 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
RXRB-203ENST00000481441 TNFRSF6BO95407 300 aa10.78□□□□□ -0.68
RXRB-203ENST00000481441 KRTAP9-2Q9BYQ4 174 aa10.78□□□□□ -0.68
RXRB-203ENST00000481441 NIT2Q9NQR4 276 aa10.77□□□□□ -0.69
RXRB-203ENST00000481441 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
RXRB-203ENST00000481441 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
RXRB-203ENST00000481441 PPP1R17O96001 155 aa10.75□□□□□ -0.69
RXRB-203ENST00000481441 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
RXRB-203ENST00000481441 A0A096LNI7 61 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 LOC389332A0A1B0GUA5 103 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 RAB5BP61020 215 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 SUMO2P61956 95 aaKnown RBP10.74□□□□□ -0.69
RXRB-203ENST00000481441 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 TMEM243Q9BU79 118 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 MAP1LC3AQ9H492 121 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms