RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 SMIM15Q7Z3B0 74 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 LINC00526Q96FQ7 95 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 CTRLP40313 264 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
TTC28-206ENST00000480563 IFITM2Q01629 132 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 AMMECR1LQ6DCA0 310 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 ISOC2Q96AB3 205 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
TTC28-206ENST00000480563 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
TTC28-206ENST00000480563 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
TTC28-206ENST00000480563 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
TTC28-206ENST00000480563 PNRC1Q12796 327 aaPredicted RBP6.9□□□□□ -1.3
TTC28-206ENST00000480563 TWIST1Q15672 202 aa6.9□□□□□ -1.3
TTC28-206ENST00000480563 LYZL1Q6UWQ5 148 aa6.9□□□□□ -1.3
TTC28-206ENST00000480563 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
TTC28-206ENST00000480563 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 A0A1W2PNN7 141 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 C9JQL5 133 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 MT-ND6P03923 174 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 XCL1P47992 114 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
TTC28-206ENST00000480563 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
TTC28-206ENST00000480563 PPP1R2P9O14990 202 aa6.88□□□□□ -1.31
TTC28-206ENST00000480563 NTF3P20783 257 aa6.88□□□□□ -1.31
TTC28-206ENST00000480563 COMMD7Q86VX2 200 aa6.88□□□□□ -1.31
TTC28-206ENST00000480563 CNFNQ9BYD5 112 aa6.88□□□□□ -1.31
TTC28-206ENST00000480563 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
TTC28-206ENST00000480563 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
TTC28-206ENST00000480563 HIGD1CA8MV81 97 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 H7C423 109 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 CCL25O15444 150 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 FGF6P10767 208 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 PRR4Q16378 134 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 V9GYV3 84 aa6.87□□□□□ -1.31
TTC28-206ENST00000480563 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 A0A1B0GUT8 65 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 F8W036 122 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 MT-ND4LP03901 98 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 RIGQ13278 110 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
TTC28-206ENST00000480563 NCR2O95944 276 aa6.85□□□□□ -1.31
TTC28-206ENST00000480563 S100A8P05109 93 aa6.85□□□□□ -1.31
TTC28-206ENST00000480563 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
TTC28-206ENST00000480563 C9orf116Q5BN46 136 aaPredicted RBP6.85□□□□□ -1.31
TTC28-206ENST00000480563 GATD1Q8NB37 220 aa6.85□□□□□ -1.31
TTC28-206ENST00000480563 ANAPC16Q96DE5 110 aa6.85□□□□□ -1.31
TTC28-206ENST00000480563 A0A1B0GW15 77 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 TMEM218A2RU14 115 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 APCSP02743 223 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
TTC28-206ENST00000480563 CAMPP49913 170 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
TTC28-206ENST00000480563 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
TTC28-206ENST00000480563 TMEM101Q96IK0 257 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
TTC28-206ENST00000480563 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 SS18Q15532 418 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
TTC28-206ENST00000480563 SEC11CQ9BY50 192 aa6.83□□□□□ -1.32
TTC28-206ENST00000480563 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
TTC28-206ENST00000480563 H0Y9J4 135 aa6.82□□□□□ -1.32
TTC28-206ENST00000480563 APOMO95445 188 aa6.82□□□□□ -1.32
TTC28-206ENST00000480563 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
TTC28-206ENST00000480563 PMCHP20382 165 aa6.81□□□□□ -1.32
TTC28-206ENST00000480563 HBBP68871 147 aa6.81□□□□□ -1.32
TTC28-206ENST00000480563 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
TTC28-206ENST00000480563 CAMK2N2Q96S95 79 aa6.81□□□□□ -1.32
TTC28-206ENST00000480563 TMEM191AQ9H0A3 160 aa6.81□□□□□ -1.32
TTC28-206ENST00000480563 A0A087WZ39 114 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
TTC28-206ENST00000480563 PPP1R17O96001 155 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 ADCYAP1P18509 176 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 MALP21145 153 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
TTC28-206ENST00000480563 MRAP2Q96G30 205 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 CTDSP1Q9GZU7 261 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 CDC42SE2Q9NRR3 84 aa6.8□□□□□ -1.32
TTC28-206ENST00000480563 I3L3M4 83 aa6.79□□□□□ -1.32
TTC28-206ENST00000480563 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
TTC28-206ENST00000480563 ESDP10768 282 aa6.79□□□□□ -1.32
TTC28-206ENST00000480563 S100PP25815 95 aa6.79□□□□□ -1.32
TTC28-206ENST00000480563 UBE2D1P51668 147 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms