RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CDC34P49427 236 aaPredicted RBP6.48□□□□□ -1.37
USP11-208ENST00000480104 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
USP11-208ENST00000480104 NDUFA1O15239 70 aa6.47□□□□□ -1.37
USP11-208ENST00000480104 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
USP11-208ENST00000480104 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
USP11-208ENST00000480104 NCR2O95944 276 aa6.46□□□□□ -1.38
USP11-208ENST00000480104 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
USP11-208ENST00000480104 RAB24Q969Q5 203 aa6.46□□□□□ -1.38
USP11-208ENST00000480104 TMEM167BQ9NRX6 74 aa6.46□□□□□ -1.38
USP11-208ENST00000480104 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
USP11-208ENST00000480104 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
USP11-208ENST00000480104 C1orf196B1AJZ1 125 aa6.45□□□□□ -1.38
USP11-208ENST00000480104 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
USP11-208ENST00000480104 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
USP11-208ENST00000480104 ALG5Q9Y673 324 aa6.45□□□□□ -1.38
USP11-208ENST00000480104 LTAP01374 205 aa6.44□□□□□ -1.38
USP11-208ENST00000480104 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
USP11-208ENST00000480104 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
USP11-208ENST00000480104 FMC1Q96HJ9 113 aa6.44□□□□□ -1.38
USP11-208ENST00000480104 SMIM3Q9BZL3 60 aa6.44□□□□□ -1.38
USP11-208ENST00000480104 V9GYH0 126 aa6.44□□□□□ -1.38
USP11-208ENST00000480104 F8WDY8 70 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 BTCP35070 178 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 UBE2G2P60604 165 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 UBE2G1P62253 170 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 TMEM241Q24JQ0 296 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 SEC22CQ9BRL7 303 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 NDUFA13Q9P0J0 144 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
USP11-208ENST00000480104 NAP1L6A6NFF2 107 aa6.42□□□□□ -1.38
USP11-208ENST00000480104 UBE2AP49459 152 aa6.42□□□□□ -1.38
USP11-208ENST00000480104 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
USP11-208ENST00000480104 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
USP11-208ENST00000480104 TRAV13-1A0A0B4J241 112 aa6.41□□□□□ -1.38
USP11-208ENST00000480104 NDUFC2-KCTD14E9PQ53 114 aa6.41□□□□□ -1.38
USP11-208ENST00000480104 H0YIZ8 118 aa6.41□□□□□ -1.38
USP11-208ENST00000480104 CXorf1O96002 111 aa6.41□□□□□ -1.38
USP11-208ENST00000480104 RNASE13Q5GAN3 156 aaKnown RBP6.4□□□□□ -1.38
USP11-208ENST00000480104 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.38
USP11-208ENST00000480104 HSPB11Q9Y547 144 aa6.4□□□□□ -1.38
USP11-208ENST00000480104 DEFA1P59665 94 aa6.39□□□□□ -1.39
USP11-208ENST00000480104 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
USP11-208ENST00000480104 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
USP11-208ENST00000480104 GATD1Q8NB37 220 aa6.39□□□□□ -1.39
USP11-208ENST00000480104 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
USP11-208ENST00000480104 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
USP11-208ENST00000480104 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
USP11-208ENST00000480104 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
USP11-208ENST00000480104 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
USP11-208ENST00000480104 FAM74A7A6NL05 159 aa6.37□□□□□ -1.39
USP11-208ENST00000480104 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
USP11-208ENST00000480104 Q8NBF4 154 aa6.37□□□□□ -1.39
USP11-208ENST00000480104 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
USP11-208ENST00000480104 TRGC1P0CF51 173 aa6.36□□□□□ -1.39
USP11-208ENST00000480104 MARVELD1Q9BSK0 173 aa6.36□□□□□ -1.39
USP11-208ENST00000480104 TP73-AS1Q9UF72 201 aa6.36□□□□□ -1.39
USP11-208ENST00000480104 SPINK1P00995 79 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 FAM19A2Q8N3H0 131 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 XAGE1AQ9HD64 81 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 CYTL1Q9NRR1 136 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
USP11-208ENST00000480104 TRBV30A0A0K0K1B3 111 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 SIX6O95475 246 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 PMCHP20382 165 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 AKR1C3P42330 323 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 MZT2BQ6NZ67 158 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 C2orf82Q6UX34 121 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 Q8N377 158 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
USP11-208ENST00000480104 KMT2DO14686 5537 aa6.34□□□□□ -1.39
USP11-208ENST00000480104 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
USP11-208ENST00000480104 I3L3M4 83 aa6.33□□□□□ -1.4
USP11-208ENST00000480104 PRLHP81277 87 aa6.33□□□□□ -1.4
USP11-208ENST00000480104 CCDC160A6NGH7 325 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 CENPXA8MT69 81 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 INMT-MINDY4F8WBC2 141 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 NOL3O60936 208 aaKnown RBP6.32□□□□□ -1.4
USP11-208ENST00000480104 MT2AP02795 61 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 FOXA3P55318 350 aaPredicted RBP6.32□□□□□ -1.4
USP11-208ENST00000480104 KIAA0087Q14695 138 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 CNPY1Q3B7I2 92 aa6.32□□□□□ -1.4
USP11-208ENST00000480104 ACTR3CQ9C0K3 210 aaPredicted RBP6.32□□□□□ -1.4
USP11-208ENST00000480104 RNASE7Q9H1E1 156 aaKnown RBP6.32□□□□□ -1.4
USP11-208ENST00000480104 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 C7orf77A4D0Y5 90 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 ATP6V0CP27449 155 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 Q6ZUT4 128 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 PLEKHB2Q96CS7 222 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
USP11-208ENST00000480104 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
USP11-208ENST00000480104 UPK1BO75841 260 aa6.3□□□□□ -1.4
USP11-208ENST00000480104 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
USP11-208ENST00000480104 STOML3Q8TAV4 291 aa6.3□□□□□ -1.4
USP11-208ENST00000480104 NUDT15Q9NV35 164 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms