RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 A4D1N5 150 aa13.93□□□□□ -0.18
TNFRSF8-204ENST00000479933 CSDC2Q9Y534 153 aaKnown RBP13.93□□□□□ -0.18
TNFRSF8-204ENST00000479933 TSPEAR-AS2P59090 65 aa13.92□□□□□ -0.18
TNFRSF8-204ENST00000479933 BEAN1Q3B7T3 259 aa13.91□□□□□ -0.18
TNFRSF8-204ENST00000479933 C11orf72Q8NBR9 251 aa13.91□□□□□ -0.18
TNFRSF8-204ENST00000479933 SPANXCQ9NY87 97 aa13.91□□□□□ -0.18
TNFRSF8-204ENST00000479933 IGLV4-3A0A075B6K6 122 aa13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 IGHV3-73A0A0B4J1V6 119 aa13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 J3QQQ9 107 aa13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 CCL24O00175 119 aa13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
TNFRSF8-204ENST00000479933 LEPROTO15243 131 aa13.89□□□□□ -0.19
TNFRSF8-204ENST00000479933 TMEM223A0PJW6 202 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 ODF3L2Q3SX64 289 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 STHQ8IWL8 128 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 OPRPNQ99935 248 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 CD28P10747 220 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 PROK1P58294 105 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
TNFRSF8-204ENST00000479933 A0A1B0GX51 115 aa13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 RS1O15537 224 aa13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 CMC4P56277 68 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 ESM1Q9NQ30 184 aa13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 APCP25054 2843 aa13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 C2orf82Q6UX34 121 aa13.87□□□□□ -0.19
TNFRSF8-204ENST00000479933 ZNF22P17026 224 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF8-204ENST00000479933 C16orf95Q9H693 158 aa13.86□□□□□ -0.19
TNFRSF8-204ENST00000479933 NACAE9PAV3 2078 aa13.86□□□□□ -0.19
TNFRSF8-204ENST00000479933 MYO9AB2RTY4 2548 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 A0A1W2PRX2 142 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 PRM2P04554 102 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 ATP5G1P05496 136 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 NDUFA7O95182 113 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 XCL2Q9UBD3 114 aa13.85□□□□□ -0.19
TNFRSF8-204ENST00000479933 WIPF1O43516 503 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 ACYP1P07311 99 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 RNASE1P07998 156 aaKnown RBP13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 Q6ZSN1 163 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 C3orf22Q8N5N4 141 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 A0A0J9YXV3 536 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 H7C423 109 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 TRIAP1O43715 76 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 ITPR3Q14573 2671 aa13.84□□□□□ -0.19
TNFRSF8-204ENST00000479933 Q1RN00 199 aa13.83□□□□□ -0.2
TNFRSF8-204ENST00000479933 UQCRQO14949 82 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 MRPS36P82909 103 aaKnown RBP13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 HIST2H2BDQ6DRA6 164 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 MUSTN1Q8IVN3 82 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 C11orf44Q8N8P7 122 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 J3KT08 172 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 LINC00694P0DN24 101 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 KRTAP1-1Q07627 177 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 CHCHD7Q9BUK0 85 aa13.82□□□□□ -0.2
TNFRSF8-204ENST00000479933 LINC00526Q96FQ7 95 aa13.81□□□□□ -0.2
TNFRSF8-204ENST00000479933 C1orf158Q8N1D5 194 aa13.81□□□□□ -0.2
TNFRSF8-204ENST00000479933 LINC01006Q8NI28 216 aa13.81□□□□□ -0.2
TNFRSF8-204ENST00000479933 IL17DQ8TAD2 202 aa13.81□□□□□ -0.2
TNFRSF8-204ENST00000479933 EPG5Q9HCE0 2579 aa13.81□□□□□ -0.2
TNFRSF8-204ENST00000479933 RPS28P62857 69 aaKnown RBP13.8□□□□□ -0.2
TNFRSF8-204ENST00000479933 C9orf153Q5TBE3 101 aa13.8□□□□□ -0.2
TNFRSF8-204ENST00000479933 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
TNFRSF8-204ENST00000479933 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
TNFRSF8-204ENST00000479933 FAM236AA0A1B0GUQ0 79 aa13.79□□□□□ -0.2
TNFRSF8-204ENST00000479933 FAM236BA0A1B0GV22 79 aa13.79□□□□□ -0.2
TNFRSF8-204ENST00000479933 SMIM9A6NGZ8 99 aa13.79□□□□□ -0.2
TNFRSF8-204ENST00000479933 H7C2G1 150 aa13.79□□□□□ -0.2
TNFRSF8-204ENST00000479933 ICOSQ9Y6W8 199 aa13.79□□□□□ -0.2
TNFRSF8-204ENST00000479933 TINCRA0A1B0GVN0 87 aa13.78□□□□□ -0.2
TNFRSF8-204ENST00000479933 COX6CP09669 75 aa13.78□□□□□ -0.2
TNFRSF8-204ENST00000479933 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
TNFRSF8-204ENST00000479933 Q9UF83 564 aa13.78□□□□□ -0.2
TNFRSF8-204ENST00000479933 HIST2H2BCQ6DN03 193 aa13.77□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGHV3OR16-12A0A075B7B8 117 aa13.76□□□□□ -0.21
TNFRSF8-204ENST00000479933 LST1O00453 97 aa13.76□□□□□ -0.21
TNFRSF8-204ENST00000479933 TLN2Q9Y4G6 2542 aa13.76□□□□□ -0.21
TNFRSF8-204ENST00000479933 TRGV1A0A0A0MS02 117 aa13.76□□□□□ -0.21
TNFRSF8-204ENST00000479933 CEMP1Q6PRD7 247 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF8-204ENST00000479933 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 J3QKU1 62 aa13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGHV3-30-3P0DP02 117 aa13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 HERVK_113P63121 156 aa13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGHV3-64A0A075B6Q5 118 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 PLA2G2AP14555 144 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 LINC00643Q86TS7 51 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 C3orf56Q8N813 242 aa13.74□□□□□ -0.21
TNFRSF8-204ENST00000479933 CXCL5P42830 114 aa13.73□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGHV3-38A0A0C4DH36 116 aa13.73□□□□□ -0.21
TNFRSF8-204ENST00000479933 FLNAP21333 2647 aaKnown RBP13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 A0A0J9YXY3 114 aa13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 IGLV1-51P01701 117 aa13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 RPL36AP83881 106 aaKnown RBP13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 RPL36ALQ969Q0 106 aaKnown RBP13.72□□□□□ -0.21
TNFRSF8-204ENST00000479933 LITAFQ99732 161 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms