RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.94
PTPRE-208ENST00000479896 EIF4EBP1Q13541 118 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-208ENST00000479896 PTH2Q96A98 100 aa9.15□□□□□ -0.94
PTPRE-208ENST00000479896 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.94
PTPRE-208ENST00000479896 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
PTPRE-208ENST00000479896 MBD6Q96DN6 1003 aa9.15□□□□□ -0.94
PTPRE-208ENST00000479896 LOC100131303A0A0U1RQF7 123 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 COX17Q14061 63 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 DYSFO75923 2080 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 RPL37AP8A6NKH3 93 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
PTPRE-208ENST00000479896 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 TIMM17BO60830 172 aa9.14□□□□□ -0.95
PTPRE-208ENST00000479896 SPTSSBQ8NFR3 76 aa9.13□□□□□ -0.95
PTPRE-208ENST00000479896 TSHBP01222 138 aa9.13□□□□□ -0.95
PTPRE-208ENST00000479896 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
PTPRE-208ENST00000479896 FSHBP01225 129 aa9.13□□□□□ -0.95
PTPRE-208ENST00000479896 LINC00526Q96FQ7 95 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 U3KQK5 164 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
PTPRE-208ENST00000479896 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRE-208ENST00000479896 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
PTPRE-208ENST00000479896 DENND4AQ7Z401 1863 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 TRBV30A0A0K0K1B3 111 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 BRK1Q8WUW1 75 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 C20orf197Q8N268 126 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
PTPRE-208ENST00000479896 KLLNB2CW77 178 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 LTBP2Q14767 1821 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 G3V4G9 280 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 TRIAP1O43715 76 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 CRIP1P50238 77 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 Q6ZQY7 126 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 C2orf16Q68DN1 1984 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-208ENST00000479896 SMR3AQ99954 134 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 Q8N9L7 120 aa9.1□□□□□ -0.95
PTPRE-208ENST00000479896 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
PTPRE-208ENST00000479896 PCNX2A6NKB5 2137 aa9.09□□□□□ -0.95
PTPRE-208ENST00000479896 RNASE3P12724 160 aaKnown RBP9.09□□□□□ -0.95
PTPRE-208ENST00000479896 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
PTPRE-208ENST00000479896 M0QXV9 152 aa9.09□□□□□ -0.95
PTPRE-208ENST00000479896 Q8IZM0 81 aa9.09□□□□□ -0.95
PTPRE-208ENST00000479896 NBASA2RRP1 2371 aa9.09□□□□□ -0.96
PTPRE-208ENST00000479896 Q6ZPA2 131 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 V9GYY9 64 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 COL4A4P53420 1690 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-208ENST00000479896 Q6ZS46 218 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 CHCHD7Q9BUK0 85 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 COL4A3Q01955 1670 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
PTPRE-208ENST00000479896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-208ENST00000479896 TECTAO75443 2155 aa9.07□□□□□ -0.96
PTPRE-208ENST00000479896 RETNQ9HD89 108 aa9.07□□□□□ -0.96
PTPRE-208ENST00000479896 UQCRQO14949 82 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 PRR9Q5T870 116 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 NOTCH3Q9UM47 2321 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 PCNX1Q96RV3 2341 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 A8MZ25 164 aa9.06□□□□□ -0.96
PTPRE-208ENST00000479896 CYSRT1A8MQ03 144 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 ATP5EP56381 51 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-208ENST00000479896 Q6ZVQ6 151 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 C16orf95Q9H693 158 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 ZFHX2Q9C0A1 2572 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-208ENST00000479896 OBSL1O75147 1896 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
PTPRE-208ENST00000479896 EGFEM1PQ0D2K5 195 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 C1orf134Q5TEV5 83 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 MAPKAPK5-AS1Q8N8E1 139 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 CIRBP-AS1Q8TBR5 109 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 MUC6Q6W4X9 2439 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 NRACQ8N912 160 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 CRIP3Q6Q6R5 217 aa9.04□□□□□ -0.96
PTPRE-208ENST00000479896 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
PTPRE-208ENST00000479896 NDUFC1O43677 76 aa9.03□□□□□ -0.96
PTPRE-208ENST00000479896 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
PTPRE-208ENST00000479896 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
PTPRE-208ENST00000479896 FAM240AA0A1B0GVK7 77 aa9.03□□□□□ -0.96
PTPRE-208ENST00000479896 CHD3Q12873 2000 aaKnown RBP9.03□□□□□ -0.96
PTPRE-208ENST00000479896 AVPP01185 164 aa9.02□□□□□ -0.96
PTPRE-208ENST00000479896 KRTAP10-9P60411 292 aa9.02□□□□□ -0.96
PTPRE-208ENST00000479896 FAM208BQ5VWN6 2430 aa9.02□□□□□ -0.97
PTPRE-208ENST00000479896 PRM2P04554 102 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms