RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
SREBF1-212ENST00000478616 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
SREBF1-212ENST00000478616 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
SREBF1-212ENST00000478616 CAMPP49913 170 aa12.04□□□□□ -0.48
SREBF1-212ENST00000478616 RNASEKQ6P5S7 137 aaKnown RBP12.04□□□□□ -0.48
SREBF1-212ENST00000478616 FAM229AH3BQW9 127 aa12.03□□□□□ -0.48
SREBF1-212ENST00000478616 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
SREBF1-212ENST00000478616 SUMO2P61956 95 aaKnown RBP12.03□□□□□ -0.48
SREBF1-212ENST00000478616 FOXI1Q12951 378 aa12.03□□□□□ -0.48
SREBF1-212ENST00000478616 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
SREBF1-212ENST00000478616 MRPL52Q86TS9 123 aaKnown RBP12.03□□□□□ -0.48
SREBF1-212ENST00000478616 CHCHD10Q8WYQ3 142 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-212ENST00000478616 FAM104AQ969W3 186 aa12.03□□□□□ -0.48
SREBF1-212ENST00000478616 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
SREBF1-212ENST00000478616 AMMECR1LQ6DCA0 310 aa12.02□□□□□ -0.49
SREBF1-212ENST00000478616 SLC7A5P1Q8MH63 180 aa12.02□□□□□ -0.49
SREBF1-212ENST00000478616 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
SREBF1-212ENST00000478616 OR5A1Q8NGJ0 315 aa12.02□□□□□ -0.49
SREBF1-212ENST00000478616 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
SREBF1-212ENST00000478616 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-212ENST00000478616 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
SREBF1-212ENST00000478616 hDV102S1A0JD36 115 aa12.01□□□□□ -0.49
SREBF1-212ENST00000478616 ZNF25P17030 456 aaPredicted RBP12.01□□□□□ -0.49
SREBF1-212ENST00000478616 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
SREBF1-212ENST00000478616 VCYO14598 125 aa12□□□□□ -0.49
SREBF1-212ENST00000478616 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
SREBF1-212ENST00000478616 C7orf77A4D0Y5 90 aa11.99□□□□□ -0.49
SREBF1-212ENST00000478616 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
SREBF1-212ENST00000478616 A0A1B0GW15 77 aa11.98□□□□□ -0.49
SREBF1-212ENST00000478616 NPYP01303 97 aa11.98□□□□□ -0.49
SREBF1-212ENST00000478616 RPL32P62910 135 aaKnown RBP11.98□□□□□ -0.49
SREBF1-212ENST00000478616 HBBP68871 147 aa11.98□□□□□ -0.49
SREBF1-212ENST00000478616 D6R8Y8 96 aa11.97□□□□□ -0.49
SREBF1-212ENST00000478616 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
SREBF1-212ENST00000478616 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
SREBF1-212ENST00000478616 ZNF664Q8N3J9 261 aa11.97□□□□□ -0.49
SREBF1-212ENST00000478616 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
SREBF1-212ENST00000478616 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-212ENST00000478616 CCL25O15444 150 aa11.96□□□□□ -0.49
SREBF1-212ENST00000478616 APOC3P02656 99 aa11.96□□□□□ -0.49
SREBF1-212ENST00000478616 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
SREBF1-212ENST00000478616 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
SREBF1-212ENST00000478616 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
SREBF1-212ENST00000478616 CKS2P33552 79 aa11.95□□□□□ -0.5
SREBF1-212ENST00000478616 XCL1P47992 114 aa11.95□□□□□ -0.5
SREBF1-212ENST00000478616 RNASE13Q5GAN3 156 aaKnown RBP11.95□□□□□ -0.5
SREBF1-212ENST00000478616 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
SREBF1-212ENST00000478616 PPP1R17O96001 155 aa11.94□□□□□ -0.5
SREBF1-212ENST00000478616 RPL39P62891 51 aaKnown RBP11.94□□□□□ -0.5
SREBF1-212ENST00000478616 RHEBQ15382 184 aa11.94□□□□□ -0.5
SREBF1-212ENST00000478616 Q6ZUT4 128 aa11.94□□□□□ -0.5
SREBF1-212ENST00000478616 LINC00526Q96FQ7 95 aa11.94□□□□□ -0.5
SREBF1-212ENST00000478616 SMIM2Q9BVW6 85 aa11.94□□□□□ -0.5
SREBF1-212ENST00000478616 HNRNPA3P51991 378 aaKnown RBP11.93□□□□□ -0.5
SREBF1-212ENST00000478616 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
SREBF1-212ENST00000478616 SVBPQ8N300 66 aa11.93□□□□□ -0.5
SREBF1-212ENST00000478616 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
SREBF1-212ENST00000478616 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
SREBF1-212ENST00000478616 IMMP2LQ96T52 175 aa11.93□□□□□ -0.5
SREBF1-212ENST00000478616 PLA2G1BP04054 148 aaKnown RBP11.92□□□□□ -0.5
SREBF1-212ENST00000478616 FCER1GP30273 86 aa11.92□□□□□ -0.5
SREBF1-212ENST00000478616 RPS10P5Q9NQ39 176 aa11.92□□□□□ -0.5
SREBF1-212ENST00000478616 SNAPINO95295 136 aa11.91□□□□□ -0.5
SREBF1-212ENST00000478616 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
SREBF1-212ENST00000478616 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
SREBF1-212ENST00000478616 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
SREBF1-212ENST00000478616 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-212ENST00000478616 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
SREBF1-212ENST00000478616 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
SREBF1-212ENST00000478616 PHOX2AO14813 284 aa11.9□□□□□ -0.5
SREBF1-212ENST00000478616 TCAPO15273 167 aa11.9□□□□□ -0.5
SREBF1-212ENST00000478616 CD164L2Q6UWJ8 174 aa11.9□□□□□ -0.5
SREBF1-212ENST00000478616 S100A8P05109 93 aa11.89□□□□□ -0.51
SREBF1-212ENST00000478616 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
SREBF1-212ENST00000478616 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
SREBF1-212ENST00000478616 PPBPP02775 128 aa11.88□□□□□ -0.51
SREBF1-212ENST00000478616 COX6A2Q02221 97 aa11.88□□□□□ -0.51
SREBF1-212ENST00000478616 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
SREBF1-212ENST00000478616 A0A087WYN8 130 aa11.87□□□□□ -0.51
SREBF1-212ENST00000478616 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
SREBF1-212ENST00000478616 SS18Q15532 418 aa11.87□□□□□ -0.51
SREBF1-212ENST00000478616 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
SREBF1-212ENST00000478616 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
SREBF1-212ENST00000478616 TRAV9-1A0A075B6T8 112 aa11.86□□□□□ -0.51
SREBF1-212ENST00000478616 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-212ENST00000478616 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
SREBF1-212ENST00000478616 S100PP25815 95 aa11.86□□□□□ -0.51
SREBF1-212ENST00000478616 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
SREBF1-212ENST00000478616 A0A096LNI7 61 aa11.84□□□□□ -0.51
SREBF1-212ENST00000478616 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
SREBF1-212ENST00000478616 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
SREBF1-212ENST00000478616 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
SREBF1-212ENST00000478616 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
SREBF1-212ENST00000478616 MRPS36P82909 103 aaKnown RBP11.83□□□□□ -0.52
SREBF1-212ENST00000478616 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
SREBF1-212ENST00000478616 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
SREBF1-212ENST00000478616 IGHV3OR16-9A0A0B4J2B5 98 aa11.81□□□□□ -0.52
SREBF1-212ENST00000478616 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
SREBF1-212ENST00000478616 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
SREBF1-212ENST00000478616 LOC389332A0A1B0GUA5 103 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms