RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SPINK9Q5DT21 86 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 SPATA31B1PQ5VZV4 182 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 TCF24Q7RTU0 167 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 DAZ4Q86SG3 579 aaKnown RBP2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 OR10P1Q8NGE3 313 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 DCANP1Q8TF63 244 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 TRGV9Q99603 122 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 SMIM3Q9BZL3 60 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 SH3BGRL3Q9H299 93 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 MRPL36Q9P0J6 103 aaKnown RBP2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 GNG13Q9P2W3 67 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 RABAC1Q9UI14 185 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 NAGKQ9UJ70 344 aa2.1□□□□□ -2.07
CDC42BPA-212ENST00000478573 IGKV1D-37A0A075B6S9 117 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 A0A1B0GXF2 115 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 A8MTW9 85 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 H3BRN7 92 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 ISLRO14498 428 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 SSSCA1O60232 199 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 CXorf1O96002 111 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 AKR1C3P42330 323 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 TCTAP57738 103 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 SLC38A11Q08AI6 406 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 ADIRFQ15847 76 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 USF2Q15853 346 aaPredicted RBP2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 DEFB135Q30KP9 77 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 S100A7AQ86SG5 101 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 RPP25LQ8N5L8 163 aaKnown RBP2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 SFRP2Q96HF1 295 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 TMEM208Q9BTX3 173 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 SNHG12Q9BXW3 62 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 MS4A6AQ9H2W1 248 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 OSTCQ9NRP0 149 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 TMEM167BQ9NRX6 74 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 ZNF586Q9NXT0 402 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 PSENENQ9NZ42 101 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 IL36BQ9NZH7 164 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 UQCR10Q9UDW1 63 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 FUT9Q9Y231 359 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
CDC42BPA-212ENST00000478573 MUC4Q99102 2169 aa2.09□□□□□ -2.08
CDC42BPA-212ENST00000478573 KMT2CQ8NEZ4 4911 aaKnown RBP2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 A0A1W2PRE2 83 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 CRXO43186 299 aaPredicted RBP2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 CST7O76096 145 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 PPBPP02775 128 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 GPX1P07203 203 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 RD3LP0DJH9 198 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 IAPPP10997 89 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 MIFP14174 115 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 CDC34P49427 236 aaPredicted RBP2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 DEFB131AP59861 70 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 UBE2G2P60604 165 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 MRPL54Q6P161 138 aaKnown RBP2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 FOXI2Q6ZQN5 318 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 FA2HQ7L5A8 372 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 ATP5L2Q7Z4Y8 100 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 CMTM2Q8TAZ6 248 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 BLNKQ8WV28 456 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 PMCHL2Q9BQD1 86 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 VAMP8Q9BV40 100 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 NPCDR1Q9BY65 106 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 NPVFQ9HCQ7 196 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRAPPC1Q9Y5R8 145 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 URGCP-MRPS24S4R325 110 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 SACSQ9NZJ4 4579 aa2.08□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGKV1OR2-108A0A075B7D4 117 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 SMIM27A0A1W2PRY6 76 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 TMEM189A5PLL7 270 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 SMIM9A6NGZ8 99 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 H3BP45 60 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 COX7A2P2O60397 106 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGLC2P0DOY2 106 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGLC3P0DOY3 106 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF25P17030 456 aaPredicted RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 RPL7P18124 248 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 CEBPGP53567 150 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 TAS2R45P59539 299 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 COTL1Q14019 142 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 SPANXN5Q5MJ07 72 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 LCN15Q6UWW0 184 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF705AQ6ZN79 300 aaPredicted RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 Q8NAQ8 132 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 ZNF738Q8NE65 137 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 C1orf64Q8NEQ6 169 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 MRPL32Q9BYC8 188 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 LAMTOR2Q9Y2Q5 125 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 KLK5Q9Y337 293 aaPredicted RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 PLECQ15149 4684 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 KMT2AQ03164 3969 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 HECTD4Q9Y4D8 3996 aa2.07□□□□□ -2.08
CDC42BPA-212ENST00000478573 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRAV10A0A0B4J240 114 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 A0A0J9YX75 114 aa2.06□□□□□ -2.08
CDC42BPA-212ENST00000478573 TRBV6-1A0A0K0K1D8 114 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms