RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 LENEPQ9Y5L5 61 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 LINC00312Q9Y6C7 94 aa-0.62□□□□□ -2.51
HPS3-205ENST00000478525 USP9YO00507 2555 aaPredicted RBP-0.62□□□□□ -2.51
HPS3-205ENST00000478525 DOCK1Q14185 1865 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 MYO18BQ8IUG5 2567 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 LOC285095A0A1B0GVY8 99 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 TSTD3H0UI37 97 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 J3QR89 54 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 SSSCA1O60232 199 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 SNCGO76070 127 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 NDUFB6O95139 128 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 SIX6O95475 246 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 CMPK1P30085 196 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 RRAS2P62070 204 aaPredicted RBP-0.63□□□□□ -2.51
HPS3-205ENST00000478525 ALX1Q15699 326 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 CCDC153Q494R4 210 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 TMEM244Q5VVB8 128 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 BAGE2Q86Y30 109 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 SPTSSAQ969W0 71 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.63□□□□□ -2.51
HPS3-205ENST00000478525 QRICH2Q9H0J4 1663 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 DNAH3Q8TD57 4116 aa-0.63□□□□□ -2.51
HPS3-205ENST00000478525 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 ZNF236Q9UL36 1845 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 MYH7P12883 1935 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 KNL1Q8NG31 2342 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 TEP1Q99973 2627 aaKnown RBP-0.64□□□□□ -2.51
HPS3-205ENST00000478525 IFT140Q96RY7 1462 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 TRAV36DV7A0A075B6V5 113 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 H0YGG7 62 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 IL5P05113 134 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 UBE2G1P62253 170 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 HIST1H1AQ02539 215 aaPredicted RBP-0.64□□□□□ -2.51
HPS3-205ENST00000478525 Q8N8P6 123 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 AMELXQ99217 191 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 HOPXQ9BPY8 73 aaPredicted RBP-0.64□□□□□ -2.51
HPS3-205ENST00000478525 DDA1Q9BW61 102 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 LSM2Q9Y333 95 aaKnown RBP-0.64□□□□□ -2.51
HPS3-205ENST00000478525 V9GYH0 126 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
HPS3-205ENST00000478525 PAPPA2Q9BXP8 1791 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 ERCC6Q03468 1493 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 ARHGEF10O15013 1369 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 PSME4Q14997 1843 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 CLPSL1A2RUU4 121 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 TMEM238C9JI98 176 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 TNFSF15O95150 251 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 MT-ND4LP03901 98 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 GUCA1AP43080 201 aaPredicted RBP-0.65□□□□□ -2.51
HPS3-205ENST00000478525 WHAMMP3Q1A5X7 153 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 C9orf62Q8N4C0 152 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 SPTSSBQ8NFR3 76 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 C10orf82Q8WW14 230 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 COPS9Q8WXC6 57 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 NDUFA4L2Q9NRX3 87 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 GSKIPQ9P0R6 139 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 HIGD1AQ9Y241 93 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 A0A0G2JMZ2 1700 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 ARHGEF12Q9NZN5 1544 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 PDCD11Q14690 1871 aaKnown RBP-0.65□□□□□ -2.51
HPS3-205ENST00000478525 OVOS2A0A0J9YW53 1432 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 OVOS2Q6IE36 1432 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 CASKIN1Q8WXD9 1431 aa-0.65□□□□□ -2.51
HPS3-205ENST00000478525 BTAF1O14981 1849 aa-0.66□□□□□ -2.51
HPS3-205ENST00000478525 ZNF518AQ6AHZ1 1483 aa-0.66□□□□□ -2.51
HPS3-205ENST00000478525 SONP18583 2426 aaKnown RBP-0.66□□□□□ -2.51
HPS3-205ENST00000478525 KIAA0556O60303 1618 aa-0.66□□□□□ -2.51
HPS3-205ENST00000478525 SPAARA0A1B0GVQ0 90 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 F8VRH5 84 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 ARPC5O15511 151 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 DEFB112Q30KQ8 113 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 MORN2Q502X0 79 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 C10orf128Q5T292 105 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 C12orf73Q69YU5 71 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 Q6AWC8 147 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 TMEM263Q8WUH6 116 aaKnown RBP-0.66□□□□□ -2.52
HPS3-205ENST00000478525 SEC11CQ9BY50 192 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 COL14A1Q05707 1796 aaKnown RBP-0.66□□□□□ -2.52
HPS3-205ENST00000478525 DISP2A7MBM2 1401 aa-0.66□□□□□ -2.52
HPS3-205ENST00000478525 FMN2Q9NZ56 1722 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 LAMA1P25391 3075 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 ACACAQ13085 2346 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 AKAP9Q99996 3911 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 TRBV7-3A0A075B6L6 115 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 TRAV13-2A0A0B4J235 113 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 MGPP08493 103 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 MIC13Q5XKP0 118 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 KCNRGQ8N5I3 272 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 TCEAL4Q96EI5 215 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 SPRR2FQ96RM1 72 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 MGST2Q99735 147 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 FAIMQ9NVQ4 179 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 SMPXQ9UHP9 88 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 GINS2Q9Y248 185 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 PPIP5K1Q6PFW1 1433 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 ADGRB1O14514 1584 aa-0.67□□□□□ -2.52
HPS3-205ENST00000478525 ANKRD36A6QL64 1941 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 COL4A6Q14031 1691 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 CPSF4LA6NMK7 179 aaKnown RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms