RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 KIAA1644Q3SXP7 199 aa12.28□□□□□ -0.44
PLOD3-212ENST00000478082 LINC00518Q8N0U6 118 aa12.28□□□□□ -0.44
PLOD3-212ENST00000478082 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.44
PLOD3-212ENST00000478082 PHOX2AO14813 284 aa12.27□□□□□ -0.44
PLOD3-212ENST00000478082 KRTAP10-1P60331 282 aa12.27□□□□□ -0.44
PLOD3-212ENST00000478082 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
PLOD3-212ENST00000478082 S100PP25815 95 aa12.26□□□□□ -0.45
PLOD3-212ENST00000478082 IGLV5-52A0A0A0MRZ9 124 aa12.26□□□□□ -0.45
PLOD3-212ENST00000478082 ZNF25P17030 456 aaPredicted RBP12.26□□□□□ -0.45
PLOD3-212ENST00000478082 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
PLOD3-212ENST00000478082 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
PLOD3-212ENST00000478082 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
PLOD3-212ENST00000478082 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
PLOD3-212ENST00000478082 MRPL52Q86TS9 123 aaKnown RBP12.25□□□□□ -0.45
PLOD3-212ENST00000478082 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
PLOD3-212ENST00000478082 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
PLOD3-212ENST00000478082 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
PLOD3-212ENST00000478082 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
PLOD3-212ENST00000478082 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
PLOD3-212ENST00000478082 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
PLOD3-212ENST00000478082 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
PLOD3-212ENST00000478082 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 S100A12P80511 92 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 LINC01620Q4KN68 170 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
PLOD3-212ENST00000478082 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 GCSHP23434 173 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 Q6ZUT4 128 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
PLOD3-212ENST00000478082 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.46
PLOD3-212ENST00000478082 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.46
PLOD3-212ENST00000478082 PRSS1P07477 247 aa12.2□□□□□ -0.46
PLOD3-212ENST00000478082 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
PLOD3-212ENST00000478082 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
PLOD3-212ENST00000478082 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
PLOD3-212ENST00000478082 Q8N8P6 123 aa12.19□□□□□ -0.46
PLOD3-212ENST00000478082 RAB5AP20339 215 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 IFI27P40305 119 aaPredicted RBP12.18□□□□□ -0.46
PLOD3-212ENST00000478082 MRPL18Q9H0U6 180 aaKnown RBP12.18□□□□□ -0.46
PLOD3-212ENST00000478082 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
PLOD3-212ENST00000478082 CDK2AP2O75956 126 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 XCL1P47992 114 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 RAB5BP61020 215 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 HAMPP81172 84 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
PLOD3-212ENST00000478082 CCL25O15444 150 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 CTAG1AP78358 180 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 FOXI1Q12951 378 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
PLOD3-212ENST00000478082 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 FAM30AQ9NZY2 134 aa12.17□□□□□ -0.46
PLOD3-212ENST00000478082 YPEL4Q96NS1 127 aa12.16□□□□□ -0.46
PLOD3-212ENST00000478082 COLCA2A8K830 154 aa12.15□□□□□ -0.46
PLOD3-212ENST00000478082 XGP55808 180 aa12.15□□□□□ -0.46
PLOD3-212ENST00000478082 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
PLOD3-212ENST00000478082 C15orf56Q8N910 161 aa12.15□□□□□ -0.46
PLOD3-212ENST00000478082 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
PLOD3-212ENST00000478082 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 COX19Q49B96 90 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 C14orf177Q52M58 125 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 MT-ND6P03923 174 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 SLPIP03973 132 aa12.13□□□□□ -0.47
PLOD3-212ENST00000478082 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
PLOD3-212ENST00000478082 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 SS18Q15532 418 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 HIGD2BQ4VC39 106 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 C2orf66Q6UXQ4 117 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
PLOD3-212ENST00000478082 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
PLOD3-212ENST00000478082 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
PLOD3-212ENST00000478082 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
PLOD3-212ENST00000478082 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
PLOD3-212ENST00000478082 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
PLOD3-212ENST00000478082 C12orf57Q99622 126 aa12.1□□□□□ -0.47
PLOD3-212ENST00000478082 AKR1D1P51857 326 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 CYSLTR1Q9Y271 337 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 PYGO1Q9Y3Y4 419 aa12.09□□□□□ -0.47
PLOD3-212ENST00000478082 C5orf52A6NGY3 159 aa12.08□□□□□ -0.48
PLOD3-212ENST00000478082 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
PLOD3-212ENST00000478082 FAT1Q14517 4588 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 K7EMI3 77 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 Q6ZSA8 131 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
PLOD3-212ENST00000478082 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 S100A6P06703 90 aa12.05□□□□□ -0.48
PLOD3-212ENST00000478082 CNBPP62633 177 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms