RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 M0R2P5 195 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 CRYBA4P53673 196 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 RPL39P62891 51 aaKnown RBP3.6□□□□□ -1.83
SF3B6-202ENST00000478050 FOXI1Q12951 378 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 LYRM7Q5U5X0 104 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 C20orf203Q8NBC4 194 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 LINC00476Q8WZB0 136 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 DUX3Q96PT4 197 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 TENM1Q9UKZ4 2725 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 SORL1Q92673 2214 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 SVEP1Q4LDE5 3571 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 TRAV25A0A0B4J276 109 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 A0A0J9YY99 117 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 F8W1H4 67 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 G3V4G9 280 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 RHODO00212 210 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 LEPROTO15243 131 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 INSP01308 110 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 RBMY1A1P0DJD3 496 aaKnown RBP3.59□□□□□ -1.83
SF3B6-202ENST00000478050 RBMY1CP0DJD4 496 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 P0DMU3 169 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 FAM231AP0DMU4 169 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 FAM231CP0DMU5 169 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
SF3B6-202ENST00000478050 UBE2D1P51668 147 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
SF3B6-202ENST00000478050 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
SF3B6-202ENST00000478050 RBMY1FQ15415 496 aaKnown RBP3.59□□□□□ -1.83
SF3B6-202ENST00000478050 TMEM170BQ5T4T1 132 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 C18orf65Q6ZTR6 163 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 PLEKHB2Q96CS7 222 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 DNAJC30Q96LL9 226 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 SPXQ9BT56 116 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
SF3B6-202ENST00000478050 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 TMEM223A0PJW6 202 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 RBMY1BA6NDE4 496 aaKnown RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 RBMY1EA6NEQ0 496 aaKnown RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 J3QQQ9 107 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 J3QR89 54 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 SAP30O75446 220 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 RBMY1DP0C7P1 496 aaKnown RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 ZNF22P17026 224 aaPredicted RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 EMP1P54849 157 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 DEFB136Q30KP8 78 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 DEFB114Q30KQ6 69 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 TMEM61Q8N0U2 210 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 SLC25A29Q8N8R3 303 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 ZNRF2Q8NHG8 242 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 DLX4Q92988 240 aaPredicted RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 VCX2Q9H322 139 aa3.58□□□□□ -1.84
SF3B6-202ENST00000478050 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
SF3B6-202ENST00000478050 TMEM238C9JI98 176 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 RS1O15537 224 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-30P01768 117 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-30-5P0DP03 117 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 CD28P10747 220 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 CMC4P56277 68 aaPredicted RBP3.57□□□□□ -1.84
SF3B6-202ENST00000478050 TSPEAR-AS2P59090 65 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 RPL24P83731 157 aaKnown RBP3.57□□□□□ -1.84
SF3B6-202ENST00000478050 COTL1Q14019 142 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 CFAP126Q5VTH2 177 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 Q6ZSV7 163 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
SF3B6-202ENST00000478050 RNF183Q96D59 192 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 AMELXQ99217 191 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 LINC01587Q99440 93 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 SPANXA1Q9NS26 97 aa3.57□□□□□ -1.84
SF3B6-202ENST00000478050 MRPL16Q9NX20 251 aaKnown RBP3.57□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-73A0A0B4J1V6 119 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 A0A0J9YXV3 536 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 H3BMG7 143 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 APOMO95445 188 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 TSPAN13O95857 204 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 HTN1P15515 57 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 UBE2D3P61077 147 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 UBE2D2P62837 147 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 MRPS36P82909 103 aaKnown RBP3.56□□□□□ -1.84
SF3B6-202ENST00000478050 NDUFA11Q86Y39 141 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 C11orf72Q8NBR9 251 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 ATP6V0E2Q8NHE4 81 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 DEFB104AQ8WTQ1 72 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
SF3B6-202ENST00000478050 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
SF3B6-202ENST00000478050 TRBV20-1A0A075B6N2 111 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.55□□□□□ -1.84
SF3B6-202ENST00000478050 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV1-58A0A0C4DH39 117 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 NHLRC4P0CG21 123 aaPredicted RBP3.55□□□□□ -1.84
SF3B6-202ENST00000478050 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 CFC1P0CG37 223 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 PROK1P58294 105 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms