RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 TRIQKQ629K1 86 aa3.61□□□□□ -1.83
USP33-208ENST00000477949 OR10AG1Q8NH19 301 aa3.61□□□□□ -1.83
USP33-208ENST00000477949 ZFP30Q9Y2G7 519 aa3.61□□□□□ -1.83
USP33-208ENST00000477949 IGKV3OR2-268A0A0C4DH90 116 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 A0A1W2PRE2 83 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 M0QY20 66 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 LYRM1O43325 122 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 SH2D1AO60880 128 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 NOL3O60936 208 aaKnown RBP3.6□□□□□ -1.83
USP33-208ENST00000477949 IL7P13232 177 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 TSKUQ8WUA8 353 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 PGLYRP4Q96LB8 373 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 SEC22CQ9BRL7 303 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 HSPB11Q9Y547 144 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 ARL2-SNX15V9GYD0 113 aa3.6□□□□□ -1.83
USP33-208ENST00000477949 ZNF861PO60384 105 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 TSHBP01222 138 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 CXCL1P09341 107 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 ARL14EPLP0DKL9 152 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 GCHFRP30047 84 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
USP33-208ENST00000477949 CTAG1AP78358 180 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 SERF2P84101 59 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 LINC00242Q5T6M2 205 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 NKX6-2Q9C056 277 aaPredicted RBP3.59□□□□□ -1.83
USP33-208ENST00000477949 TMEM167BQ9NRX6 74 aa3.59□□□□□ -1.83
USP33-208ENST00000477949 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 TRAV34A0A0B4J273 112 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 SNAI2O43623 268 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 CXorf1O96002 111 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 RPL12P30050 165 aaKnown RBP3.58□□□□□ -1.84
USP33-208ENST00000477949 XCL1P47992 114 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 RPL18AQ02543 176 aaKnown RBP3.58□□□□□ -1.84
USP33-208ENST00000477949 Q86TA4 180 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 HIST1H2BAQ96A08 127 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 NUDT15Q9NV35 164 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
USP33-208ENST00000477949 TMSB15BA0A087X1C1 80 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
USP33-208ENST00000477949 HMGB3O15347 200 aaKnown RBP3.57□□□□□ -1.84
USP33-208ENST00000477949 CCL25O15444 150 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 MPC2O95563 127 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 MBP02144 154 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 OR5AL1P0C617 328 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 CDC34P49427 236 aaPredicted RBP3.57□□□□□ -1.84
USP33-208ENST00000477949 PAPPA-AS1Q5QFB9 102 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 OR5A1Q8NGJ0 315 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 OPRPNQ99935 248 aaPredicted RBP3.57□□□□□ -1.84
USP33-208ENST00000477949 PSMG3Q9BT73 122 aaPredicted RBP3.57□□□□□ -1.84
USP33-208ENST00000477949 WFDC1Q9HC57 220 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 TNFSF18Q9UNG2 199 aa3.57□□□□□ -1.84
USP33-208ENST00000477949 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 CCDC160A6NGH7 325 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 BCL2L11O43521 198 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 SIX6O95475 246 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 PET100P0DJ07 73 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 ATP6V0CP27449 155 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 NKX2-5P52952 324 aaPredicted RBP3.56□□□□□ -1.84
USP33-208ENST00000477949 EIF5AL1Q6IS14 154 aaKnown RBP3.56□□□□□ -1.84
USP33-208ENST00000477949 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
USP33-208ENST00000477949 FAM19A5Q7Z5A7 132 aaPredicted RBP3.56□□□□□ -1.84
USP33-208ENST00000477949 PPP1R1CQ8WVI7 109 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
USP33-208ENST00000477949 MUC21A0A140T8X8 626 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 FAM240BA0A1B0GVZ2 78 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 C19orf71A6NCJ1 209 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 M0QXV9 152 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 PEX7O00628 323 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 LTAP01374 205 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 ESDP10768 282 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 H2BFSP57053 126 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 LRRC37A5PQ49AS3 106 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 ISOC2Q96AB3 205 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 FMC1Q96HJ9 113 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 CAMK2N2Q96S95 79 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 TCEAL7Q9BRU2 100 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 ACTR3CQ9C0K3 210 aaPredicted RBP3.55□□□□□ -1.84
USP33-208ENST00000477949 CTDSP1Q9GZU7 261 aa3.55□□□□□ -1.84
USP33-208ENST00000477949 FAM74A7A6NL05 159 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 H7C423 109 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 UBE2L6O14933 153 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 S100A9P06702 114 aaKnown RBP3.54□□□□□ -1.84
USP33-208ENST00000477949 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 FHITP49789 147 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 DEFA3P59666 94 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 COTL1Q14019 142 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 SS18Q15532 418 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 LINC00299Q6ZSB3 139 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 CCDC32Q9BV29 185 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 SMIM3Q9BZL3 60 aa3.54□□□□□ -1.84
USP33-208ENST00000477949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
USP33-208ENST00000477949 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
USP33-208ENST00000477949 SMIM17P0DL12 118 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 NTF3P20783 257 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 UBE2BP63146 152 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 FAM229BQ4G0N7 80 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms