RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CIRBP-AS1Q8TBR5 109 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 DNAJC30Q96LL9 226 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 AP5S1Q9NUS5 200 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
SMARCB1-206ENST00000477836 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 IFI27P40305 119 aaPredicted RBP6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 RPL32P62910 135 aaKnown RBP6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 Q8N8P6 123 aa6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 Q9HAA7 133 aa6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 HHLA3Q9XRX5 114 aa6.4□□□□□ -1.38
SMARCB1-206ENST00000477836 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 TRBV7-3A0A075B6L6 115 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 TRBV27A0A0K0K1C4 114 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 VCYO14598 125 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 LINC00614P0C842 121 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 S100A2P29034 98 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 FCER1GP30273 86 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 CRYBA4P53673 196 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 LINC00310P59036 64 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 GAGE1Q13065 139 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 GAGE4Q13068 117 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 GAGE5Q13069 117 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 WFDC2Q14508 124 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 PDZD11Q5EBL8 140 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 NIT1Q86X76 327 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 KIR2DL4Q99706 377 aa6.39□□□□□ -1.39
SMARCB1-206ENST00000477836 IGHV1-24A0A0C4DH33 117 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 C5orf52A6NGY3 159 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 I3L3M4 83 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 K7EMI3 77 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 TCAPO15273 167 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 ESDP10768 282 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 GYPEP15421 78 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 AMTP48728 403 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 UBE2D3P61077 147 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 UBE2D2P62837 147 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 MRPL23Q16540 153 aaKnown RBP6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
SMARCB1-206ENST00000477836 LINC01546A6NGU7 62 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 LINC00694P0DN24 101 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 COTL1Q14019 142 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 LAGE3Q14657 143 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 DAZ4Q86SG3 579 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 DAZ3Q9NR90 486 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 Q9UF83 564 aa6.37□□□□□ -1.39
SMARCB1-206ENST00000477836 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 LECT2O14960 151 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 NUPR1O60356 82 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 TSHBP01222 138 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 HBDP02042 147 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 LELP1Q5T871 98 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 TMEM18Q96B42 140 aa6.36□□□□□ -1.39
SMARCB1-206ENST00000477836 IBA57-AS1B1ANH7 110 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 FABP4P15090 132 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 G0S2P27469 103 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 ODF1Q14990 250 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 Q6ZRU5 148 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 FAM19A2Q8N3H0 131 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
SMARCB1-206ENST00000477836 A0A096LNJ9 63 aa6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 SH2D6Q7Z4S9 175 aa6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 ATP6V0E2Q8NHE4 81 aa6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
SMARCB1-206ENST00000477836 LINC01549A6NIU2 74 aa6.33□□□□□ -1.4
SMARCB1-206ENST00000477836 IFITM10A6NMD0 228 aa6.33□□□□□ -1.4
SMARCB1-206ENST00000477836 LEPROTL1O95214 131 aa6.33□□□□□ -1.4
SMARCB1-206ENST00000477836 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
SMARCB1-206ENST00000477836 TRBV25-1A0A075B6N4 114 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 TMEM243Q9BU79 118 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 TM2D2Q9BX73 214 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
SMARCB1-206ENST00000477836 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 UBE2L6O14933 153 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 AKR1D1P51857 326 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
SMARCB1-206ENST00000477836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 ATP5LO75964 103 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms