RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 Q6ZUT4 128 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
PRPF39-203ENST00000477626 F5H768 121 aa8.37□□□□□ -1.07
PRPF39-203ENST00000477626 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
PRPF39-203ENST00000477626 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 H3BNG1 76 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 PHLDA1Q8WV24 401 aaPredicted RBP8.36□□□□□ -1.07
PRPF39-203ENST00000477626 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 DEFB4AO15263 64 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 H0Y8G0 127 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
PRPF39-203ENST00000477626 OR5A1Q8NGJ0 315 aa8.36□□□□□ -1.07
PRPF39-203ENST00000477626 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
PRPF39-203ENST00000477626 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
PRPF39-203ENST00000477626 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
PRPF39-203ENST00000477626 PRSS1P07477 247 aa8.35□□□□□ -1.07
PRPF39-203ENST00000477626 HECTD4Q9Y4D8 3996 aa8.35□□□□□ -1.07
PRPF39-203ENST00000477626 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 GAGE1Q13065 139 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 GAGE4Q13068 117 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 GAGE5Q13069 117 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 COX6A2Q02221 97 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 TIRAPP58753 221 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 COTL1Q14019 142 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 Q6ZN92 141 aa8.34□□□□□ -1.07
PRPF39-203ENST00000477626 ZMAT5Q9UDW3 170 aaKnown RBP8.34□□□□□ -1.07
PRPF39-203ENST00000477626 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
PRPF39-203ENST00000477626 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
PRPF39-203ENST00000477626 A0A096LPF7 62 aa8.33□□□□□ -1.08
PRPF39-203ENST00000477626 LITAFQ99732 161 aa8.33□□□□□ -1.08
PRPF39-203ENST00000477626 DEFB130BP0DP73 79 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 DEFB130AP0DP74 79 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
PRPF39-203ENST00000477626 SLC25A34Q6PIV7 304 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 EMP1P54849 157 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
PRPF39-203ENST00000477626 BVES-AS1Q5T3Y7 98 aa8.32□□□□□ -1.08
PRPF39-203ENST00000477626 MGAM2Q2M2H8 2515 aa8.31□□□□□ -1.08
PRPF39-203ENST00000477626 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
PRPF39-203ENST00000477626 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
PRPF39-203ENST00000477626 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
PRPF39-203ENST00000477626 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 GYPEP15421 78 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 PRADC1Q9BSG0 188 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 DEFA6Q01524 100 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
PRPF39-203ENST00000477626 CHAC1Q9BUX1 264 aa8.29□□□□□ -1.08
PRPF39-203ENST00000477626 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
PRPF39-203ENST00000477626 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
PRPF39-203ENST00000477626 ATP5G1P05496 136 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 TMEM97Q5BJF2 176 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 ATP6V0E2Q8NHE4 81 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 PLEKHB2Q96CS7 222 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 LEPROTO15243 131 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 Q8N3U1 123 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 PRR34Q9NV39 138 aa8.28□□□□□ -1.08
PRPF39-203ENST00000477626 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
PRPF39-203ENST00000477626 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 IGHV3OR16-9A0A0B4J2B5 98 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 M0R143 59 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 DAD1P61803 113 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 Q6ZTC4 211 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 VCX2Q9H322 139 aa8.27□□□□□ -1.09
PRPF39-203ENST00000477626 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
PRPF39-203ENST00000477626 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
PRPF39-203ENST00000477626 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
PRPF39-203ENST00000477626 A0A0J9YY99 117 aa8.26□□□□□ -1.09
PRPF39-203ENST00000477626 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
PRPF39-203ENST00000477626 PAX4O43316 350 aa8.26□□□□□ -1.09
PRPF39-203ENST00000477626 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
PRPF39-203ENST00000477626 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
PRPF39-203ENST00000477626 SPANXB1Q9NS25 103 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-203ENST00000477626 LYPD5Q6UWN5 251 aa8.25□□□□□ -1.09
PRPF39-203ENST00000477626 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-203ENST00000477626 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
PRPF39-203ENST00000477626 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
PRPF39-203ENST00000477626 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
PRPF39-203ENST00000477626 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
PRPF39-203ENST00000477626 NMUP48645 174 aa8.24□□□□□ -1.09
PRPF39-203ENST00000477626 TCTAP57738 103 aa8.24□□□□□ -1.09
PRPF39-203ENST00000477626 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
PRPF39-203ENST00000477626 TAX1BP3O14907 124 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 RBX1P62877 108 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 LELP1Q5T871 98 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 DNAH11Q96DT5 4516 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 FBN3Q75N90 2809 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms